RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TBK1Q9UHD2 729 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 SAP30BPQ9UHR5 308 aaKnown RBP11.95□□□□□ -0.5
PALB2-206ENST00000568219 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 HAUS3Q68CZ6 603 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 KCNV1Q6PIU1 500 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 CCDC105Q8IYK2 499 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
PALB2-206ENST00000568219 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 C6orf50Q9HD87 102 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 RASAL2Q9UJF2 1139 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 SNX24Q9Y343 169 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 USP32Q8NFA0 1604 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 SETDB1Q15047 1291 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 CREG2Q8IUH2 290 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 ARHGEF2Q92974 986 aaKnown RBP11.95□□□□□ -0.5
PALB2-206ENST00000568219 ZBTB10Q96DT7 871 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 PNMA2Q9UL42 364 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 POLE2P56282 527 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 CALCOCO2Q13137 446 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 RBBP5Q15291 538 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 NKX2-3Q8TAU0 364 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 STAG1Q8WVM7 1258 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 SRGNP10124 158 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 SATB1Q01826 763 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 ZBTB16Q05516 673 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 CAPN12Q6ZSI9 719 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 LMNTD2Q8IXW0 634 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 AENQ8WTP8 325 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 CASKIN2Q8WXE0 1202 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 UTYO14607 1347 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 MAN2A1Q16706 1144 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 MIEF2Q96C03 454 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 STAMBPL1Q96FJ0 436 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 CELF4Q9BZC1 486 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 NOD2Q9HC29 1040 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 PXDNLA1KZ92 1463 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 SMIM22K7EJ46 135 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 PGRMC1O00264 195 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 CETN3O15182 167 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 STX2P32856 288 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 ERFP50548 548 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 ZNF131P52739 623 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
PALB2-206ENST00000568219 PSMD1Q99460 953 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
PALB2-206ENST00000568219 DDX20Q9UHI6 824 aaKnown RBP11.94□□□□□ -0.5
PALB2-206ENST00000568219 A0A1W2PQC6 194 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ZNF233A6NK53 670 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 EVI5O60447 810 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 FGGP02679 453 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 COPB2P35606 906 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 SCTRP47872 440 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 CTSWP56202 376 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 CHMP6Q96FZ7 201 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 FMO2Q99518 471 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 NOP53Q9NZM5 478 aaKnown RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 WNT7AO00755 349 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 CYP27B1O15528 508 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 TRIM37O94972 964 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 KLRC1P26715 233 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ZNF76P36508 570 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 ZRSR2Q15696 482 aaKnown RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 ZBTB38Q8NAP3 1195 aaPredicted RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 AMFRQ9UKV5 643 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 CEMIPQ8WUJ3 1361 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 STK36Q9NRP7 1315 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 FLOT1O75955 427 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 H2AFZP0C0S5 128 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 HSD17B3P37058 310 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 PPP2R5BQ15173 497 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 H2AFVQ71UI9 128 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 FUKQ8N0W3 1084 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms