RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FAM184BQ9ULE4 1060 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 PCDHA6Q9UN73 950 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 PCDHA8Q9Y5H6 950 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
CDH1-204ENST00000562118 CCDC85CA6NKD9 419 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 EDIL3O43854 480 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 COL6A1P12109 1028 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 ICAM3P32942 547 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 HMGN5P82970 282 aaKnown RBP15.39■□□□□ 0.05
CDH1-204ENST00000562118 PDE4DQ08499 809 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 DUSP28Q4G0W2 176 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 CCSAPQ6IQ19 270 aaPredicted RBP15.39■□□□□ 0.05
CDH1-204ENST00000562118 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 BICD2Q8TD16 824 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 PDGFCQ9NRA1 345 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 ZHX1Q9UKY1 873 aaPredicted RBP15.39■□□□□ 0.05
CDH1-204ENST00000562118 PCDHA4Q9UN74 947 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 SYNRGQ9UMZ2 1314 aa15.39■□□□□ 0.05
CDH1-204ENST00000562118 DOCK5Q9H7D0 1870 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 NKRFO15226 690 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDH1-204ENST00000562118 ARIH2O95376 493 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 CYP3A4P08684 503 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 SMPD1P17405 629 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 EN2P19622 333 aaPredicted RBP15.38■□□□□ 0.05
CDH1-204ENST00000562118 CCND2P30279 289 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 ADCYAP1R1P41586 468 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 GJA9P57773 515 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 FCHSD1Q86WN1 690 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 REXO1Q8N1G1 1221 aaKnown RBP15.38■□□□□ 0.05
CDH1-204ENST00000562118 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 EMID1Q96A84 441 aaPredicted RBP15.38■□□□□ 0.05
CDH1-204ENST00000562118 ANO3Q9BYT9 981 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 UBIAD1Q9Y5Z9 338 aa15.38■□□□□ 0.05
CDH1-204ENST00000562118 SCN10AQ9Y5Y9 1956 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 SPDYE3A6NKU9 549 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 TGFB3P10600 412 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 RARBP10826 455 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 SOX10P56693 466 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 ALG1Q9BT22 464 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
CDH1-204ENST00000562118 SPATA31C2B4DYI2 1134 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 DNM1LO00429 736 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 MYCP01106 439 aaPredicted RBP15.36■□□□□ 0.05
CDH1-204ENST00000562118 HOXD8P13378 290 aaPredicted RBP15.36■□□□□ 0.05
CDH1-204ENST00000562118 ITGB5P18084 799 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 CIITAP33076 1130 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 TNFAIP2Q03169 654 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 LRRC41Q15345 812 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 NIPA1Q7RTP0 329 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 BLIDQ8IZY5 108 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
CDH1-204ENST00000562118 GPRASP2Q96D09 838 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 WDR11Q9BZH6 1224 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 XPNPEP3Q9NQH7 507 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 GJB4Q9NTQ9 266 aa15.36■□□□□ 0.05
CDH1-204ENST00000562118 DDX41Q9UJV9 622 aaKnown RBP15.36■□□□□ 0.05
CDH1-204ENST00000562118 IGLV3-22A0A075B6J6 115 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 DTNBO60941 627 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 MMP1P03956 469 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 XBP1P17861 261 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 CNGA1P29973 690 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 TTLL4Q14679 1199 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 EEPD1Q7L9B9 569 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 MBOAT7Q96N66 472 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
CDH1-204ENST00000562118 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
CDH1-204ENST00000562118 MEIS1O00470 390 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 MAFGO15525 162 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 FIBPO43427 364 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 NLRP5P59047 1200 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 SP2Q02086 613 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 FBXO18Q8NFZ0 1043 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 RASGRP4Q8TDF6 673 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 LENG9Q96B70 501 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 INTS4Q96HW7 963 aaKnown RBP15.34■□□□□ 0.05
CDH1-204ENST00000562118 JADE2Q9NQC1 790 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 KCNJ14Q9UNX9 436 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 PHF24Q9UPV7 400 aa15.34■□□□□ 0.05
CDH1-204ENST00000562118 WDR81Q562E7 1941 aa15.33■□□□□ 0.05
CDH1-204ENST00000562118 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 A6NJR5 290 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 K7ELQ4 463 aaPredicted RBP15.33■□□□□ 0.04
CDH1-204ENST00000562118 MYCLP12524 364 aaPredicted RBP15.33■□□□□ 0.04
CDH1-204ENST00000562118 KCNA2P16389 499 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 UBA1P22314 1058 aaKnown RBP15.33■□□□□ 0.04
CDH1-204ENST00000562118 CYP3A7P24462 503 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 USP11P51784 963 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 SNX17Q15036 470 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms