RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 LUZP1Q86V48 1076 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 GRAMD1CQ8IYS0 662 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 MTRQ99707 1265 aa16.29■□□□□ 0.2
ZEB1-218ENST00000560196 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
ZEB1-218ENST00000560196 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 IRF6O14896 467 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 IKBKBO14920 756 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 BCRP11274 1271 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 ZNF76P36508 570 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 FKBP1BP68106 108 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 SETQ01105 290 aaPredicted RBP16.28■□□□□ 0.2
ZEB1-218ENST00000560196 GRB10Q13322 594 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
ZEB1-218ENST00000560196 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 SYTL5Q8TDW5 730 aaPredicted RBP16.28■□□□□ 0.2
ZEB1-218ENST00000560196 WNK4Q96J92 1243 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 DACH1Q9UI36 760 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
ZEB1-218ENST00000560196 A0A087WWV3 80 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
ZEB1-218ENST00000560196 POTEMA6NI47 508 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 MEIS1O00470 390 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 MSH4O15457 936 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 BMP6P22004 513 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 AMPD3Q01432 767 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 CEP55Q53EZ4 464 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 XRRA1Q6P2D8 792 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 MOB2Q70IA6 237 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 KCTD17Q8N5Z5 321 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 OTUD5Q96G74 571 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 GTPBP4Q9BZE4 634 aaKnown RBP16.27■□□□□ 0.2
ZEB1-218ENST00000560196 NT5C3AQ9H0P0 336 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 RMND1Q9NWS8 449 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
ZEB1-218ENST00000560196 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 BECN2A8MW95 431 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 RPS6P62753 249 aaKnown RBP16.26■□□□□ 0.19
ZEB1-218ENST00000560196 KCNB1Q14721 858 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
ZEB1-218ENST00000560196 CNNM4Q6P4Q7 775 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 FASTKD5Q7L8L6 764 aaKnown RBP16.26■□□□□ 0.19
ZEB1-218ENST00000560196 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 LRRC15Q8TF66 581 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 SLC5A5Q92911 643 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 C7orf25Q9BPX7 421 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 MXRA8Q9BRK3 442 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 LRRC27Q9C0I9 530 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
ZEB1-218ENST00000560196 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 STAT3P40763 770 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
ZEB1-218ENST00000560196 CUL4BQ13620 913 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 MOGSQ13724 837 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
ZEB1-218ENST00000560196 HAUS3Q68CZ6 603 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 GADL1Q6ZQY3 521 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 AOPEPQ8N6M6 819 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 ACAD9Q9H845 621 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 RIPK3Q9Y572 518 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 UBIAD1Q9Y5Z9 338 aa16.25■□□□□ 0.19
ZEB1-218ENST00000560196 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
ZEB1-218ENST00000560196 SOCS7O14512 581 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 PSMD10O75832 226 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 RPN1P04843 607 aaKnown RBP16.24■□□□□ 0.19
ZEB1-218ENST00000560196 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
ZEB1-218ENST00000560196 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
ZEB1-218ENST00000560196 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 CYP2W1Q8TAV3 490 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 RAD54LQ92698 747 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 SLC10A4Q96EP9 437 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 RIT2Q99578 217 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 RRAGCQ9HB90 399 aa16.24■□□□□ 0.19
ZEB1-218ENST00000560196 ADCY5O95622 1261 aa16.23■□□□□ 0.19
ZEB1-218ENST00000560196 MUTP22033 750 aa16.23■□□□□ 0.19
ZEB1-218ENST00000560196 RPA1P27694 616 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms