RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 USP17L20D6RJB6 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 H0YIN7 160 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L24Q0WX57 530 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 PSMD2Q13200 908 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 SEPT2Q15019 361 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 FKBP15Q5T1M5 1219 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 USP17L6PQ6QN14 398 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 TMCO3Q6UWJ1 677 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 SRGAP1Q7Z6B7 1085 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 GJA10Q969M2 543 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 NAPGQ99747 312 aaPredicted RBP26.26■■□□□ 1.79
SORL1-210ENST00000532451 AGPAT5Q9NUQ2 364 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 SERPINA10Q9UK55 444 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 ZBED6P86452 979 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 HYIQ5T013 277 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 EPC1Q9H2F5 836 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 SCN9AQ15858 1988 aa26.26■■□□□ 1.79
SORL1-210ENST00000532451 KDM3AQ9Y4C1 1321 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 ICA1Q05084 483 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 FIGNQ5HY92 759 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 TMEM179Q6ZVK1 233 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 SIAH1Q8IUQ4 282 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 CEP112Q8N8E3 955 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 PCMTD1Q96MG8 357 aaPredicted RBP26.25■■□□□ 1.79
SORL1-210ENST00000532451 ANO3Q9BYT9 981 aa26.25■■□□□ 1.79
SORL1-210ENST00000532451 FGFR1OPO95684 399 aaKnown RBP26.24■■□□□ 1.79
SORL1-210ENST00000532451 LRRC63Q05C16 580 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 ZNHIT6Q9NWK9 470 aaKnown RBP26.24■■□□□ 1.79
SORL1-210ENST00000532451 ZNF646O15015 1829 aaPredicted RBP26.24■■□□□ 1.79
SORL1-210ENST00000532451 A0A1W2PQJ5 194 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 NKRFO15226 690 aaKnown RBP eCLIP26.24■■□□□ 1.79
SORL1-210ENST00000532451 ZRANB2O95218 330 aaKnown RBP eCLIP26.24■■□□□ 1.79
SORL1-210ENST00000532451 USP11P51784 963 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 CHMP4BP1P59074 171 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 NT5C3AQ9H0P0 336 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 ZNF219Q9P2Y4 722 aaPredicted RBP26.24■■□□□ 1.79
SORL1-210ENST00000532451 FHOD1Q9Y613 1164 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 ABCB11O95342 1321 aa26.24■■□□□ 1.79
SORL1-210ENST00000532451 VWA3BQ502W6 1294 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 DNAJC19Q96DA6 116 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 IQCDQ96DY2 449 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 HAUS4Q9H6D7 363 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 ARFGEF1Q9Y6D6 1849 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 HERVK_113P62684 666 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 KCNMB3Q9NPA1 279 aa26.23■■□□□ 1.79
SORL1-210ENST00000532451 SLX4Q8IY92 1834 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 CYP3A7-CYP3A51PA0A087WV96 503 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 CYP3A7P24462 503 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 CYLC1P35663 651 aaPredicted RBP26.22■■□□□ 1.79
SORL1-210ENST00000532451 KRT83P78385 493 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 FOXR2Q6PJQ5 311 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 MBOAT7Q96N66 472 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 GDF11O95390 407 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 COASYQ13057 564 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 AP3B2Q13367 1082 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 MAN2A1Q16706 1144 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 ABCB5Q2M3G0 1257 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 GMCL1P1Q8NEA9 526 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 GUCA1BQ9UMX6 200 aa26.22■■□□□ 1.79
SORL1-210ENST00000532451 F5H6K3 240 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 MEIS2O14770 477 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 SLC26A4O43511 780 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 PNMA6AP0CW24 399 aaPredicted RBP26.21■■□□□ 1.79
SORL1-210ENST00000532451 KLRC3Q07444 240 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 ZNF662Q6ZS27 426 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 CCDC170Q8IYT3 715 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 TSG101Q99816 390 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 NDST4Q9H3R1 872 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 ZSWIM4Q9H7M6 989 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 TRIM10Q9UDY6 481 aa26.21■■□□□ 1.79
SORL1-210ENST00000532451 PUF60Q9UHX1 559 aaKnown RBP26.21■■□□□ 1.79
SORL1-210ENST00000532451 LRRC41Q15345 812 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 AOC3Q16853 763 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 MOXD1Q6UVY6 613 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 LRRC55Q6ZSA7 311 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 GLIS3Q8NEA6 775 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 GMCL1Q96IK5 515 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 PARD6BQ9BYG5 372 aa26.2■■□□□ 1.79
SORL1-210ENST00000532451 NHEJ1Q9H9Q4 299 aaPredicted RBP26.2■■□□□ 1.79
SORL1-210ENST00000532451 CDK17Q00537 523 aa26.2■■□□□ 1.78
SORL1-210ENST00000532451 MYOCDQ8IZQ8 938 aa26.2■■□□□ 1.78
SORL1-210ENST00000532451 AMNQ9BXJ7 453 aa26.2■■□□□ 1.78
SORL1-210ENST00000532451 BMP2KQ9NSY1 1161 aaPredicted RBP26.2■■□□□ 1.78
SORL1-210ENST00000532451 PANK4Q9NVE7 773 aa26.2■■□□□ 1.78
SORL1-210ENST00000532451 DMTNQ08495 405 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 WHAMMP3Q1A5X7 153 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 TDRD3Q9H7E2 651 aaKnown RBP26.19■■□□□ 1.78
SORL1-210ENST00000532451 KIAA1024Q9UPX6 916 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 SIK3Q9Y2K2 1263 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 ATRNL1Q5VV63 1379 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 EIF3CLB5ME19 914 aaKnown RBP26.19■■□□□ 1.78
SORL1-210ENST00000532451 NDUFB10O96000 172 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 CHRNA5P30532 468 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 MCTP2Q6DN12 878 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 SLFN12Q8IYM2 578 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 CRYGNQ8WXF5 182 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 CNKSR1Q969H4 720 aa26.19■■□□□ 1.78
SORL1-210ENST00000532451 EIF3CQ99613 913 aaKnown RBP26.19■■□□□ 1.78
SORL1-210ENST00000532451 E9PMD0 336 aa26.18■■□□□ 1.78
SORL1-210ENST00000532451 ENTPD3O75355 529 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms