RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 GPAA1O43292 621 aa23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 IGDCC4Q8TDY8 1250 aa23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 XAGE3Q8WTP9 111 aa23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 ZNF317Q96PQ6 595 aaPredicted RBP23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 MAGEC2Q9UBF1 373 aaPredicted RBP23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 SWAP70Q9UH65 585 aa23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 SLC12A7Q9Y666 1083 aa23.09■■□□□ 1.29
NKX3-2-201ENST00000382438 CHN1P15882 459 aa23.08■■□□□ 1.29
NKX3-2-201ENST00000382438 COPS6Q7L5N1 327 aa23.08■■□□□ 1.29
NKX3-2-201ENST00000382438 SLC17A8Q8NDX2 589 aa23.08■■□□□ 1.29
NKX3-2-201ENST00000382438 SELENOSQ9BQE4 189 aa23.08■■□□□ 1.29
NKX3-2-201ENST00000382438 FAM129AQ9BZQ8 928 aa23.08■■□□□ 1.29
NKX3-2-201ENST00000382438 RPN1P04843 607 aaKnown RBP23.08■■□□□ 1.28
NKX3-2-201ENST00000382438 KLHL29Q96CT2 875 aa23.08■■□□□ 1.28
NKX3-2-201ENST00000382438 PSMD1Q99460 953 aa23.08■■□□□ 1.28
NKX3-2-201ENST00000382438 LY9Q9HBG7 655 aa23.08■■□□□ 1.28
NKX3-2-201ENST00000382438 ZMYND8Q9ULU4 1186 aaPredicted RBP23.08■■□□□ 1.28
NKX3-2-201ENST00000382438 FMN2Q9NZ56 1722 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 BCL9LQ86UU0 1499 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 MMEP08473 750 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 SCNN1BP51168 640 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 MKRN4PQ13434 485 aaPredicted RBP23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 PDIA6Q15084 440 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 FAM81AQ8TBF8 368 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 DDX21Q9NR30 783 aaKnown RBP eCLIP23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 MYH7P12883 1935 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 STK36Q9NRP7 1315 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 VIMP08670 466 aaKnown RBP23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 PCK1P35558 622 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 GFPT1Q06210 699 aaPredicted RBP23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 RNF220Q5VTB9 566 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 PI16Q6UXB8 463 aa23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 RBM41Q96IZ5 413 aaKnown RBP23.07■■□□□ 1.28
NKX3-2-201ENST00000382438 AGBL2Q5U5Z8 902 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 ATG9AQ7Z3C6 839 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 ZNF594Q96JF6 807 aaPredicted RBP23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 TRIM4Q9C037 500 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 SAMD15Q9P1V8 674 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 PLEKHG3A1L390 1219 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 ADAM9Q13443 819 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 LRRC24Q50LG9 513 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 PIGWQ7Z7B1 504 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 ZKSCAN3Q9BRR0 538 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 ISCUQ9H1K1 167 aa23.06■■□□□ 1.28
NKX3-2-201ENST00000382438 EPHB6O15197 1021 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 PTPROQ16827 1216 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 ZNF530Q6P9A1 599 aaPredicted RBP23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 LRRC45Q96CN5 670 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 PCMTD2Q9NV79 361 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 AFF2P51816 1311 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 PPFIA2O75334 1257 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 ECEL1O95672 775 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 IFNAR2P48551 515 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 EHHADHQ08426 723 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 C1QTNF12Q5T7M4 302 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 NOX5Q96PH1 765 aa23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 FAM207AQ9NSI2 230 aaPredicted RBP23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 NKX1-2Q9UD57 310 aaPredicted RBP23.05■■□□□ 1.28
NKX3-2-201ENST00000382438 A0A087WZG4 1122 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 SART1O43290 800 aaKnown RBP23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 PALMO75781 387 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 EEF1GP26641 437 aaKnown RBP23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 MSH2P43246 934 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 LRRC23Q53EV4 343 aaPredicted RBP23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 WASF1Q92558 559 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 WDR35Q9P2L0 1181 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 CLSTN1O94985 981 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 SLC1A4P43007 532 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 ITIH4Q14624 930 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 RPS6KC1Q96S38 1066 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 MYH7BA7E2Y1 1941 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 SMIM23A6NLE4 172 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 GTPBP6O43824 516 aaPredicted RBP23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 IFNAR1P17181 557 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 CUL3Q13618 768 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 IFI16Q16666 785 aaKnown RBP23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 PDXDC2PQ6P474 469 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 LONP2Q86WA8 852 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 ADSSL1Q8N142 457 aa23.04■■□□□ 1.28
NKX3-2-201ENST00000382438 SCARF1Q14162 830 aa23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 PRMT1Q99873 361 aaKnown RBP23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 UBE2OQ9C0C9 1292 aaKnown RBP23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 PNMA3Q9UL41 463 aa23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 WDR19Q8NEZ3 1342 aa23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 TMEM154Q6P9G4 183 aa23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 TMEM165Q9HC07 324 aa23.03■■□□□ 1.28
NKX3-2-201ENST00000382438 ECM29Q5VYK3 1845 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 ASAP2O43150 1006 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 RFC5P40937 340 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 MTIF2P46199 727 aaKnown RBP23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 ATP11AP98196 1134 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 TEX9Q8N6V9 391 aa23.02■■□□□ 1.28
NKX3-2-201ENST00000382438 SHISA4Q96DD7 197 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms