RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ARHGAP27Q6ZUM4 889 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 CFAP61Q8NHU2 1237 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 THAP12O43422 761 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 TTLL1O95922 423 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 IFNB1P01574 187 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 GOLGA8HP0CJ92 632 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 STMN1P16949 149 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 COG7P83436 770 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 PEX19P40855 299 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 SESN3P58005 492 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 PRKG1Q13976 671 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 NEK8Q86SG6 692 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 RAB20Q9NX57 234 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 PCDHA7Q9UN72 937 aa13.41□□□□□ -0.26
NPLOC4-202ENST00000374747 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 SUN1O94901 812 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 CHGBP05060 677 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 LRCH2Q5VUJ6 765 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 RPAINQ86UA6 219 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 CSRNP1Q96S65 589 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 ZSWIM5Q9P217 1185 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 IVNS1ABPQ9Y6Y0 642 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 IFNAR1P17181 557 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 GUCY2DQ02846 1103 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 PPP2R5CQ13362 524 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 TRIM4Q9C037 500 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 TPX2Q9ULW0 747 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 MGEA5O60502 916 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 BBOF1Q8ND07 529 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 IWS1Q96ST2 819 aa13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-202ENST00000374747 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 EVI5O60447 810 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 GRM1Q13255 1194 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 DBN1Q16643 649 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 GPKOWQ92917 476 aaPredicted RBP eCLIP13.39□□□□□ -0.277e-6■□□□□ 8.1
NPLOC4-202ENST00000374747 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 H2AFZP0C0S5 128 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 RPS6KA2Q15349 733 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 H2AFVQ71UI9 128 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 EFCC1Q9HA90 598 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 CNGA1P29973 690 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 NDUFA8P51970 172 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 hCG_1984214I3L0E3 225 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 FOSP01100 380 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 OR52Z1P0C646 297 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 USP17L8P0C7I0 530 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 PI4KBQ9UBF8 816 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 FAF1Q9UNN5 650 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-202ENST00000374747 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 NFIXQ14938 502 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 KCTD16Q68DU8 428 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 ATG9AQ7Z3C6 839 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 RUNDC3BQ96NL0 473 aa13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-202ENST00000374747 PPP1R9AQ9ULJ8 1098 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms