RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 RNF26Q9BY78 433 aaPredicted RBP24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 IPO11Q9UI26 975 aaKnown RBP24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 LLGL1Q15334 1064 aa24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 DBNDD1Q9H9R9 158 aa24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 BZW2Q9Y6E2 419 aaKnown RBP24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 TMEM2Q9UHN6 1383 aa24.1■■□□□ 1.45
TM9SF3-201ENST00000371142 CFAP65Q6ZU64 1925 aaKnown RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 CASP2P42575 452 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 PDE1BQ01064 536 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 ERFEQ4G0M1 354 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 GPATCH4Q5T3I0 446 aaKnown RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 PI4K2BQ8TCG2 481 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 SERPINB6P35237 376 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 LIG3P49916 1009 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 BPIFB4P59827 614 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 NSUN7Q8NE18 718 aaKnown RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 FTOQ9C0B1 505 aaKnown RBP eCLIP24.09■■□□□ 1.455e-11■■□□□ 13.4
TM9SF3-201ENST00000371142 ANAPC5Q9UJX4 755 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 PRAMEF22A3QJZ6 481 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 INO80B-WBP1J3KQ70 363 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 C11orf57Q6ZUT1 292 aaPredicted RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 INO80BQ9C086 356 aaPredicted RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 SEC31AO94979 1220 aaKnown RBP24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 CLTAP09496 248 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 COA7Q96BR5 231 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 CUEDC2Q9H467 287 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 ERBB4Q15303 1308 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 ATP6V0A1Q93050 837 aa24.09■■□□□ 1.45
TM9SF3-201ENST00000371142 GOLGA8SH3BPF8 625 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 ACCSQ96QU6 501 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 ZBTB1Q9Y2K1 713 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 INSRP06213 1382 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 YEATS2Q9ULM3 1422 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 ZNF500O60304 480 aaPredicted RBP24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 MICAL1Q8TDZ2 1067 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 HVCN1Q96D96 273 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 MAN1B1Q9UKM7 699 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 PNMA2Q9UL42 364 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 LCORLQ8N3X6 602 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 LEMD3Q9Y2U8 911 aa24.08■■□□□ 1.45
TM9SF3-201ENST00000371142 DYNLT1P63172 113 aa24.08■■□□□ 1.44
TM9SF3-201ENST00000371142 DHTKD1Q96HY7 919 aaPredicted RBP24.08■■□□□ 1.44
TM9SF3-201ENST00000371142 CCDC17Q96LX7 622 aa24.08■■□□□ 1.44
TM9SF3-201ENST00000371142 LTKP29376 864 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 C2orf54Q08AI8 447 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 MIS18BP1Q6P0N0 1132 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 FAM149B1Q96BN6 582 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 PPME1Q9Y570 386 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 ABCC12Q96J65 1359 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 SLC7A3Q8WY07 619 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 SLC4A1P02730 911 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 GAP43P17677 238 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 NOP9Q86U38 636 aaKnown RBP24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 FAM133AQ8N9E0 248 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 STAP2Q9UGK3 403 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 ADD2P35612 726 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 RUNDC3BQ96NL0 473 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 NBPF3Q9H094 633 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 CDC23Q9UJX2 597 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 S100BP04271 92 aaPredicted RBP24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 ACTN1P12814 892 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 TRAPPC10P48553 1259 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 IL1RL1Q01638 556 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 ZNF658Q5TYW1 1059 aaPredicted RBP24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 PI16Q6UXB8 463 aa24.07■■□□□ 1.44
TM9SF3-201ENST00000371142 CDC25AP30304 524 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 BAG5Q9UL15 447 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 CSPG5O95196 566 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 ASPHQ12797 758 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 NR5A1Q13285 461 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 RCN2Q14257 317 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 EPB41L5Q9HCM4 733 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 EEF1GP26641 437 aaKnown RBP24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 CDC25BP30305 580 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 CXCR5P32302 372 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 ZBTB33Q86T24 672 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 CCNYQ8ND76 341 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 AK8Q96MA6 479 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 MED4Q9NPJ6 270 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 GFPT2O94808 682 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 RSRC2Q7L4I2 434 aaKnown RBP24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 MOCS3O95396 460 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 CEP170P1Q96L14 293 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 PPP1R16BQ96T49 567 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 SNX25Q9H3E2 840 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 INTS9Q9NV88 658 aaKnown RBP24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 POLR3EQ9NVU0 708 aa24.06■■□□□ 1.44
TM9SF3-201ENST00000371142 PDZD8Q8NEN9 1154 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 GPC4O75487 556 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 SGO2Q562F6 1265 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 LRGUKQ96M69 825 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 SART1O43290 800 aaKnown RBP24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 LMNB2Q03252 620 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 KRT1P04264 644 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 KCNQ4P56696 695 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 NLGN1Q8N2Q7 840 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms