RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 DDX25Q9UHL0 483 aaKnown RBP19.29■□□□□ 0.68
NDFIP1-201ENST00000253814 RTCBQ9Y3I0 505 aaKnown RBP19.29■□□□□ 0.68
NDFIP1-201ENST00000253814 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 A0A1W2PQC6 194 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 A6NNZ2 444 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 MEIS1O00470 390 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 TNFAIP3P21580 790 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 RPL13P26373 211 aaKnown RBP19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.683e-9■□□□□ 10.3
NDFIP1-201ENST00000253814 NAA25Q14CX7 972 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 E2F5Q15329 346 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 TUBB8Q3ZCM7 444 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 MFSD14BQ5SR56 506 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 EMBQ6PCB8 327 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 TMEM47Q9BQJ4 181 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 CUEDC2Q9H467 287 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 SAMD15Q9P1V8 674 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 IFNAR2P48551 515 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 COL4A3BPQ9Y5P4 624 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 IRAK1P51617 712 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 TCP10Q12799 353 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 LRP10Q7Z4F1 713 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 RASAL2Q9UJF2 1139 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 ATP8A1Q9Y2Q0 1164 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 CAPN6Q9Y6Q1 641 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
NDFIP1-201ENST00000253814 ANKRD62A6NC57 917 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 PSMD14O00487 310 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 SRGNP10124 158 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 PLCG2P16885 1265 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 DPP8Q6V1X1 898 aaPredicted RBP19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 EHD4Q9H223 541 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 RCAN1P53805 252 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 PRR16Q569H4 304 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 TRAPPC11Q7Z392 1133 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 NUCKS1Q9H1E3 243 aaKnown RBP19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 CTTNBP2NLQ9P2B4 639 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 H2AFZP0C0S5 128 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 NT5DC1Q5TFE4 455 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 GALNT17Q6IS24 598 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 H2AFVQ71UI9 128 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 DNM3Q9UQ16 869 aa19.27■□□□□ 0.68
NDFIP1-201ENST00000253814 FAM208AQ9UK61 1670 aaKnown RBP19.27■□□□□ 0.67
NDFIP1-201ENST00000253814 LAD1O00515 517 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 CLIC2O15247 247 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 HERVK_113P62684 666 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 PPP1R7Q15435 360 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 CACNA2D3Q8IZS8 1091 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 ZNF512BQ96KM6 892 aaPredicted RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 GOLPH3Q9H4A6 298 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 PSTPIP2Q9H939 334 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 RBM12Q9NTZ6 932 aaKnown RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 NOVA2Q9UNW9 492 aaKnown RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 PLAAQ9Y263 795 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 HDAC7Q8WUI4 952 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 XRN1Q8IZH2 1706 aaKnown RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MYL1P05976 194 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 GRIPAP1Q4V328 841 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 DGKHQ86XP1 1220 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 IQCDQ96DY2 449 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MRRFQ96E11 262 aaKnown RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 FRMD3A2A2Y4 597 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MAP2K7O14733 419 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 SPOPO43791 374 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 CYP2J2P51589 502 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 EXOC3L4Q17RC7 722 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MMS22LQ6ZRQ5 1243 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MYCT1Q8N699 235 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 MTRF1LQ9UGC7 380 aaKnown RBP19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 RAB21Q9UL25 225 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 PCDHA6Q9UN73 950 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 PCDHA8Q9Y5H6 950 aa19.26■□□□□ 0.67
NDFIP1-201ENST00000253814 TDP2O95551 362 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 CCDC172P0C7W6 258 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 CARSP49589 748 aaKnown RBP19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 ALS2CLQ60I27 953 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 ELOA2Q8IYF1 753 aaPredicted RBP19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 AMFRQ9UKV5 643 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 SEC23AQ15436 765 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 FAM83BQ5T0W9 1011 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 KCTD1Q719H9 257 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 DDX47Q9H0S4 455 aaKnown RBP19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 MAGEF1Q9HAY2 307 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 FANCGO15287 622 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 STAT1P42224 750 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 GTF2IP78347 998 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 TBC1D31Q96DN5 1066 aa19.25■□□□□ 0.67
NDFIP1-201ENST00000253814 OVOS2A0A0G2JMS6 1433 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 FAM237AA0A1B0GTK4 181 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 A0A1W2PRG0 241 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 DHX9Q08211 1270 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms