RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TRAPPC11Q7Z392 1133 aa18.95■□□□□ 0.62
FOXA1-201ENST00000250448 FHDC1Q9C0D6 1143 aaPredicted RBP18.95■□□□□ 0.62
FOXA1-201ENST00000250448 TRIM10Q9UDY6 481 aa18.95■□□□□ 0.62
FOXA1-201ENST00000250448 GUCA1BQ9UMX6 200 aa18.95■□□□□ 0.62
FOXA1-201ENST00000250448 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 LRRIQ3A6PVS8 624 aaPredicted RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 WNT10BO00744 389 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 RPS6KA5O75582 802 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 RPN1P04843 607 aaKnown RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 MIGA2Q7L4E1 593 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 CCDC148Q8NFR7 591 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 MED4Q9NPJ6 270 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 RRP15Q9Y3B9 282 aaKnown RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 ENTPD3O75355 529 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 TTLL1O95922 423 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 PDHBP11177 359 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
FOXA1-201ENST00000250448 SPON1Q9HCB6 807 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 MYOZ2Q9NPC6 264 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 GDAQ9Y2T3 454 aa18.94■□□□□ 0.62
FOXA1-201ENST00000250448 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 PLIN4Q96Q06 1357 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 SPDYE2Q495Y8 402 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 HEATR3Q7Z4Q2 680 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 TRAPPC10P48553 1259 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 GMPSP49915 693 aaPredicted RBP18.93■□□□□ 0.62
FOXA1-201ENST00000250448 IL17AQ16552 155 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 PIK3AP1Q6ZUJ8 805 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 HAUS4Q9H6D7 363 aa18.93■□□□□ 0.62
FOXA1-201ENST00000250448 EEF2P13639 858 aaKnown RBP18.92■□□□□ 0.62
FOXA1-201ENST00000250448 MCM7P33993 719 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 NOVP48745 357 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 NT5C2P49902 561 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 USP14P54578 494 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 NLRP5P59047 1200 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 TTBK2Q6IQ55 1244 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 C10orf67Q8IYJ2 551 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 OR8K1Q8NGG5 319 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 RASGRP4Q8TDF6 673 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 MAPK8IP1Q9UQF2 711 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 ZNF541Q9H0D2 1346 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 TTC26A0AVF1 554 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 TRIM66O15016 1216 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 GH2P01242 217 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 SLC16A2P36021 539 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 PRCPP42785 496 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 TBC1D10BQ4KMP7 808 aaPredicted RBP18.92■□□□□ 0.62
FOXA1-201ENST00000250448 KCTD1Q719H9 257 aa18.92■□□□□ 0.62
FOXA1-201ENST00000250448 H7C1D1 291 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 PHACTR2O75167 634 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 MB21D1Q8N884 522 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 DNAJC7Q99615 494 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 VIPAS39Q9H9C1 493 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.91■□□□□ 0.627e-7■□□□□ 11.2
FOXA1-201ENST00000250448 LGALS16A8MUM7 142 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 HERVK_113P62684 666 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 TNIP1Q15025 636 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 IRF2BP1Q8IU81 584 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 MICALL2Q8IY33 904 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 PIGSQ96S52 555 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 GNAQP50148 359 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 ABCB5Q2M3G0 1257 aa18.91■□□□□ 0.62
FOXA1-201ENST00000250448 LUC7L2Q9Y383 392 aaKnown RBP18.91■□□□□ 0.62
FOXA1-201ENST00000250448 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 ATRNL1Q5VV63 1379 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 TRIM49BA6NDI0 452 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 ENC1O14682 589 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
FOXA1-201ENST00000250448 MCM3P25205 808 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 CCDC96Q2M329 555 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 SIAH1Q8IUQ4 282 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 A0A1W2PQC6 194 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
FOXA1-201ENST00000250448 AARSP49588 968 aaKnown RBP eCLIP18.9■□□□□ 0.62
FOXA1-201ENST00000250448 ADSSL1Q8N142 457 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 FAM151AQ8WW52 585 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 CCDC17Q96LX7 622 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 FAM204AQ9H8W3 233 aa18.9■□□□□ 0.62
FOXA1-201ENST00000250448 LONP1P36776 959 aaKnown RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 STAT6P42226 847 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 MAP9Q49MG5 647 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 CCDC122Q5T0U0 273 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 MMS19Q96T76 1030 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 SAR1BQ9Y6B6 198 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 ICA1Q05084 483 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 PAPD7Q5XG87 772 aaKnown RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 ARL6IP4Q66PJ3 421 aaKnown RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 FOXR1Q6PIV2 292 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 CCDC84Q86UT8 332 aaPredicted RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 CNOT7Q9UIV1 285 aaKnown RBP18.89■□□□□ 0.61
FOXA1-201ENST00000250448 CAPN11Q9UMQ6 739 aa18.89■□□□□ 0.61
FOXA1-201ENST00000250448 RNF40O75150 1001 aa18.88■□□□□ 0.61
FOXA1-201ENST00000250448 EEF1GP26641 437 aaKnown RBP18.88■□□□□ 0.61
FOXA1-201ENST00000250448 TSR1Q2NL82 804 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms