RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FXR2P51116 673 aaKnown RBP eCLIP28.4■■■□□ 2.14
RAB40C-201ENST00000248139 CACNB3P54284 484 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 USP14P54578 494 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 KIF5AQ12840 1032 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 LRRC53A6NM62 1247 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L15C9J2P7 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L13C9JLJ4 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L11C9JVI0 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L18D6R9N7 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L22D6RA61 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L17D6RBQ6 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L19D6RCP7 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L20D6RJB6 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 CXCR5P32302 372 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L24Q0WX57 530 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L6PQ6QN14 398 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 ZFPM1Q8IX07 1006 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 RETREG2Q8NC44 543 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 CERKQ8TCT0 537 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 USP40Q9NVE5 1235 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 DDX25Q9UHL0 483 aaKnown RBP28.39■■■□□ 2.14
RAB40C-201ENST00000248139 PCDHAC2Q9Y5I4 1007 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 ZBTB22O15209 634 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 NELFCDQ8IXH7 590 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 CCDC170Q8IYT3 715 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 FNBP4Q8N3X1 1017 aaPredicted RBP28.39■■■□□ 2.14
RAB40C-201ENST00000248139 NLRC4Q9NPP4 1024 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 EHD2Q9NZN4 543 aa28.39■■■□□ 2.14
RAB40C-201ENST00000248139 MYH10P35580 1976 aa28.39■■■□□ 2.13
RAB40C-201ENST00000248139 MYBL2P10244 700 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 TNNT3P45378 269 aaPredicted RBP28.38■■■□□ 2.13
RAB40C-201ENST00000248139 ZNF543Q08ER8 600 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 SPA17Q15506 151 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 SECISBP2LQ93073 1101 aaKnown RBP28.38■■■□□ 2.13
RAB40C-201ENST00000248139 IFIH1Q9BYX4 1025 aaKnown RBP28.38■■■□□ 2.13
RAB40C-201ENST00000248139 E9PMD0 336 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 VAV2P52735 878 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 NFIAQ12857 509 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 DEF6Q9H4E7 631 aa28.38■■■□□ 2.13
RAB40C-201ENST00000248139 SMARCA1P28370 1054 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 SNAP25P60880 206 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 ASPRV1Q53RT3 343 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 SLF2Q8IX21 1173 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 SERPINB13Q9UIV8 391 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 PLAGL2Q9UPG8 496 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 PCDHA13Q9Y5I0 950 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 BBOX1O75936 387 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 KIF11P52732 1056 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 EZH2Q15910 746 aaKnown RBP28.37■■■□□ 2.13
RAB40C-201ENST00000248139 LRRC55Q6ZSA7 311 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 COG1Q8WTW3 980 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 TBC1D22AQ8WUA7 517 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 CRACR2AQ9BSW2 395 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 STK17AQ9UEE5 414 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 SALL4Q9UJQ4 1053 aa28.37■■■□□ 2.13
RAB40C-201ENST00000248139 TTLL1O95922 423 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 MATR3P43243 847 aaKnown RBP eCLIP28.36■■■□□ 2.13
RAB40C-201ENST00000248139 PNMA6FA0A0J9YX94 578 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 SNHG28P0DPA3 235 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 SHMT1P34896 483 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 TMC4Q7Z404 712 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 GUF1Q8N442 669 aaKnown RBP28.36■■■□□ 2.13
RAB40C-201ENST00000248139 RIN2Q8WYP3 895 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-201ENST00000248139 KCNQ5Q9NR82 932 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 UBAP1LF5GYI3 381 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 NCK2O43639 380 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 AKR1B10O60218 316 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 TAL1P17542 331 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-201ENST00000248139 GFPT1Q06210 699 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-201ENST00000248139 MAN2A1Q16706 1144 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 CERS3Q8IU89 383 aa28.36■■■□□ 2.13
RAB40C-201ENST00000248139 PVALEFA0A1B0GWK0 134 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 STAT3P40763 770 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 TCP10Q12799 353 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 ENOX2Q16206 610 aaKnown RBP28.35■■■□□ 2.13
RAB40C-201ENST00000248139 RIC8AQ9NPQ8 531 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 IGKV6D-41A0A0C4DH26 115 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 SEMA3FQ13275 785 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 WDR93Q6P2C0 686 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 HDAC7Q8WUI4 952 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 DNAJC19Q96DA6 116 aa28.35■■■□□ 2.13
RAB40C-201ENST00000248139 A0A1W2PQJ5 194 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 TRAF5O00463 557 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 FAM193AP78312 1265 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 COASYQ13057 564 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.34■■■□□ 2.13
RAB40C-201ENST00000248139 ZFP91Q96JP5 570 aaPredicted RBP28.34■■■□□ 2.13
RAB40C-201ENST00000248139 POLD4Q9HCU8 107 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 PODXL2Q9NZ53 605 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 PCDHA12Q9UN75 941 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 KIAA1024Q9UPX6 916 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 KCNMA1Q12791 1236 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 FIGNQ5HY92 759 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 NFRKBQ6P4R8 1299 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 PURBQ96QR8 312 aaKnown RBP28.34■■■□□ 2.13
RAB40C-201ENST00000248139 RAB34Q9BZG1 259 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 ZHX3Q9H4I2 956 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 PSTPIP2Q9H939 334 aa28.34■■■□□ 2.13
RAB40C-201ENST00000248139 POTEB3A0JP26 581 aa28.33■■■□□ 2.13
RAB40C-201ENST00000248139 POTECB2RU33 542 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms