RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Trappc10Q3TLI0 1259 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Krt87Q6IMF0 495 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Skiv2lQ6NZR5 1244 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 C2cd5Q7TPS5 1016 aaKnown RBP15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ube2q1Q7TSS2 422 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Q8K2W9 541 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ddx41Q91VN6 622 aaKnown RBP15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 GneQ91WG8 722 aaKnown RBP15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Pabpc6Q9D4E6 643 aaKnown RBP15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Myo1hQ9D6A1 958 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Mipol1Q9D9F8 279 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Arpp21Q9DCB4 807 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Kcnh7Q9ER47 1195 aa15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ccnt1Q9QWV9 724 aaKnown RBP15.69■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Btnl4A2CG29 586 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Klhl33G3UW92 533 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 E030030I06RikJ3QML9 246 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Prom1O54990 867 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 StrnO55106 780 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Mphosph8Q3TYA6 858 aaKnown RBP15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Etaa1Q5SVT3 877 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Fam126bQ8C729 530 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Phtf2Q8CB19 747 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tmem60Q8K174 133 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Trim29Q8R2Q0 587 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 CtsqQ91ZF4 343 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Adgrf4Q9D2L6 698 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Rpap3Q9D706 660 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Alg13Q9D8C3 1166 aaKnown RBP15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Stx6Q9JKK1 255 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Hic1Q9R1Y5 733 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Zfp804bA0A0G2JGH6 1343 aa15.68■□□□□ 0.1
Ercc1-203ENSMUST00000160369 A0A0U1RNP2 1173 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 TroapB7ZNG4 668 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tmem265E9Q8G3 109 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Pcdha4O88689 947 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Cep126Q0VBV7 1103 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Gpd2Q64521 727 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tbc1d22bQ80VE5 505 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 P2ry10Q8BFU7 328 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Zkscan1Q8BGS3 561 aaKnown RBP15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Gpc2Q8BKV1 579 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Zfp113Q8C689 439 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Atp2a1Q8R429 994 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ppp2r5dQ91V89 594 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Fgd4Q91ZT5 766 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 GraspQ9JJA9 392 aa15.67■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ccdc78D3Z5T1 437 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ampd3O08739 766 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Pcif1P59114 706 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ly9Q01965 654 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Gjb4Q02738 266 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Zfp943Q6NZP4 507 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 GypcQ78HU7 95 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 PicalmQ7M6Y3 660 aaKnown RBP15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Spata7Q80VP2 582 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Srek1Q8BZX4 494 aaKnown RBP15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 CnstQ8CBC4 711 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Btbd7Q8CFE5 1130 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Bag4Q8CI61 457 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Pkp2Q9CQ73 795 aaKnown RBP15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Lysmd1Q9D0E3 226 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Krt34Q9D646 392 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ftsj3Q9DBE9 838 aaKnown RBP15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Tfr2Q9JKX3 798 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Limd1Q9QXD8 668 aa15.66■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Map7d1A2AJI0 846 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Cpb1B2RS76 415 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Gm8882E9Q7E4 283 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Lrrc32G3XA59 663 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Esr2O08537 530 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Fzd1O70421 642 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Mpp3O88910 568 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Phka1P18826 1241 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 ArP19091 899 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 GaaP70699 953 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 ZbbxQ0P5X5 716 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Lrrfip1Q3UZ39 729 aaKnown RBP15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Fam189a2Q4FZH1 290 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Fscn1Q61553 493 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Phlda1Q62392 405 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 3830417A13RikQ8BQJ2 303 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 R3hcc1Q8BSI6 488 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Smc2Q8CG48 1191 aaKnown RBP15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ddx39aQ8VDW0 427 aaKnown RBP15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ktn1Q61595 1327 aaKnown RBP15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 Ccdc88cQ6VGS5 2009 aa15.65■□□□□ 0.1
Ercc1-203ENSMUST00000160369 AV320801A2AWL3 467 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Tbc1d2B1AVH7 922 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Jakmip2D3YXK0 820 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Rsbn1lD3Z0K6 821 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Gm15023L7MUB4 467 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Ccng2O08918 344 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Cops5O35864 334 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 EdnrbP48302 442 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Btbd1P58544 488 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Rit2P70425 217 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Gtf3c3Q3TMP1 882 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Tp53i13Q5F267 385 aa15.64■□□□□ 0.09
Ercc1-203ENSMUST00000160369 Arhgap1Q5FWK3 439 aa15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms