RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CCDC102AQ96A19 550 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PANK4Q9NVE7 773 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 IKBKBO14920 756 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ZBTB5O15062 677 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ARHGAP6O43182 974 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ETF1P62495 437 aaKnown RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 ZNF543Q08ER8 600 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 SLC15A2Q16348 729 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 CCDC181Q5TID7 509 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ANKRD40Q6AI12 368 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 KCNK18Q7Z418 384 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 CTAGE1Q96RT6 745 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 MTRQ99707 1265 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ANO3Q9BYT9 981 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PCIF1Q9H4Z3 704 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 BCAS3Q9H6U6 928 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 RAVER2Q9HCJ3 691 aaKnown RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 HDAC6Q9UBN7 1215 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PDE4DIPQ5VU43 2346 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 PCP11498 1178 aaKnown RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 SHMT1P34896 483 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 AMNQ9BXJ7 453 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 MYH14Q7Z406 1995 aaKnown RBP8.36□□□□□ -1.07
PKP4-217ENST00000628904 TTC26A0AVF1 554 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 FAM13AO94988 1023 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 SPP2Q13103 211 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 ZNF658Q5TYW1 1059 aaPredicted RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 TMCO3Q6UWJ1 677 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 SLC35F6Q8N357 371 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 PAGR1Q9BTK6 254 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 INTS13Q9NVM9 706 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 CCPG1Q9ULG6 757 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 MYMKA6NI61 221 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 CCDC169A6NNP5 214 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 GAS7O60861 476 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 ARHGAP44Q17R89 818 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 ASPRV1Q53RT3 343 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 TCP11X2Q5H9J9 407 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 SARM1Q6SZW1 724 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 ADAT2Q7Z6V5 191 aaKnown RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 ARGLU1Q9NWB6 273 aaPredicted RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 GINS2Q9Y248 185 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 TMEM150BA6NC51 233 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 BACH1O14867 736 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.077e-8■□□□□ 10.2
PKP4-217ENST00000628904 PNMA6AP0CW24 399 aaPredicted RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 POLD1P28340 1107 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 STAT2P52630 851 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 PPP4CP60510 307 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 POLR2FP61218 127 aaKnown RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 NPY5RQ15761 445 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 DNAJC21Q5F1R6 531 aaKnown RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 FAM26FQ5R3K3 315 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 POTEAQ6S8J7 498 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 RAD9BQ6WBX8 426 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 PHLDB2Q86SQ0 1253 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 DHX37Q8IY37 1157 aaKnown RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 PROCA1Q8NCQ7 364 aaPredicted RBP8.35□□□□□ -1.07
PKP4-217ENST00000628904 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 PPP1R16BQ96T49 567 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 IMPACTQ9P2X3 320 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 DNM3Q9UQ16 869 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■□□□ 14.1
PKP4-217ENST00000628904 ABCB11O95342 1321 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 COL18A1P39060 1754 aa8.35□□□□□ -1.07
PKP4-217ENST00000628904 BAZ2AQ9UIF9 1905 aaKnown RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 TMEM110-MUSTN1A8MSY1 372 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 PLEKP08567 350 aaPredicted RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 IL1R1P14778 569 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 GYS2P54840 703 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 PSMC6P62333 389 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 ARHGAP4P98171 946 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 NCBP1Q09161 790 aaKnown RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 SF3A3Q12874 501 aaKnown RBP eCLIP8.34□□□□□ -1.077e-7■■■■□ 21.2
PKP4-217ENST00000628904 RASA3Q14644 834 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 CNNM4Q6P4Q7 775 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 MED15Q96RN5 788 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 SLIT2O94813 1529 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 ASTN2O75129 1339 aaPredicted RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 RSPH10B2B2RC85 870 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 RSPH10BP0C881 870 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 CNGA4Q8IV77 575 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 RGS22Q8NE09 1264 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms