RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
MDC1-209ENST00000613547 TMX3Q96JJ7 454 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 ALG1Q9BT22 464 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 UNC93B1Q9H1C4 597 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 PXMP2Q9NR77 195 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 VPS54Q9P1Q0 977 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 ZHX1Q9UKY1 873 aaPredicted RBP15.22■□□□□ 0.03
MDC1-209ENST00000613547 KIF3AQ9Y496 699 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 ASTN1O14525 1302 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.03
MDC1-209ENST00000613547 CCDC85CA6NKD9 419 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 MEIS2O14770 477 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
MDC1-209ENST00000613547 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
MDC1-209ENST00000613547 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
MDC1-209ENST00000613547 AP3B2Q13367 1082 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 ACVR2BQ13705 512 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 TRIM29Q14134 588 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 MTFR1Q15390 333 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 STXBP2Q15833 593 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 UBE2SQ16763 222 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 TYW1BQ6NUM6 668 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 MORC4Q8TE76 937 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 VTA1Q9NP79 307 aa15.21■□□□□ 0.03
MDC1-209ENST00000613547 SEPT4O43236 478 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 CD2BP2O95400 341 aaKnown RBP15.2■□□□□ 0.02
MDC1-209ENST00000613547 GJB1P08034 283 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 NR3C2P08235 984 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 CAPN2P17655 700 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 EDNRBP24530 442 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 CCND2P30279 289 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
MDC1-209ENST00000613547 GALNT17Q6IS24 598 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 REXO1Q8N1G1 1221 aaKnown RBP15.2■□□□□ 0.02
MDC1-209ENST00000613547 FAM184AQ8NB25 1140 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 FAM184BQ9ULE4 1060 aa15.2■□□□□ 0.02
MDC1-209ENST00000613547 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 JAK2O60674 1132 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 AKR1A1P14550 325 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 ST3GAL1Q11201 340 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 PGM5Q15124 567 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 PRAMEF19Q5SWL8 479 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 PAK6Q9NQU5 681 aaPredicted RBP15.19■□□□□ 0.02
MDC1-209ENST00000613547 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
MDC1-209ENST00000613547 PCDHA6Q9UN73 950 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.19■□□□□ 0.02
MDC1-209ENST00000613547 PCDHA8Q9Y5H6 950 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 MYH6P13533 1939 aa15.19■□□□□ 0.02
MDC1-209ENST00000613547 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
MDC1-209ENST00000613547 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
MDC1-209ENST00000613547 STAM2O75886 525 aa15.18■□□□□ 0.02
MDC1-209ENST00000613547 ZNF865P0CJ78 1059 aaPredicted RBP15.18■□□□□ 0.02
MDC1-209ENST00000613547 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
MDC1-209ENST00000613547 FDPSP14324 419 aaKnown RBP15.18■□□□□ 0.02
MDC1-209ENST00000613547 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
MDC1-209ENST00000613547 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
MDC1-209ENST00000613547 U2AF1L4Q8WU68 220 aaKnown RBP15.18■□□□□ 0.02
MDC1-209ENST00000613547 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
MDC1-209ENST00000613547 PCDHA4Q9UN74 947 aa15.18■□□□□ 0.02
MDC1-209ENST00000613547 FRMPD4Q14CM0 1322 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 K7ELQ4 463 aaPredicted RBP15.17■□□□□ 0.02
MDC1-209ENST00000613547 RARBP10826 455 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
MDC1-209ENST00000613547 BLIDQ8IZY5 108 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 SNX21Q969T3 373 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
MDC1-209ENST00000613547 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
MDC1-209ENST00000613547 DTNBO60941 627 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 SGPL1O95470 568 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
MDC1-209ENST00000613547 GJA8P48165 433 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 CLK2P49760 499 aaKnown RBP15.16■□□□□ 0.02
MDC1-209ENST00000613547 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 JAKMIP3Q5VZ66 844 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 IQSEC1Q6DN90 963 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 PHF20Q9BVI0 1012 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 SPC25Q9HBM1 224 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 TMEM260Q9NX78 707 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 KCNJ14Q9UNX9 436 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
MDC1-209ENST00000613547 PLXNA1Q9UIW2 1896 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 SREBF1P36956 1147 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
MDC1-209ENST00000613547 TAPT1Q6NXT6 567 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms