RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 TANC1Q9C0D5 1861 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 EVPLQ92817 2033 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 RBM47A0AV96 593 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 ORC4O43929 436 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ZEB2O60315 1214 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 SORBS3O60504 671 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ARHGEF15O94989 841 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ARIH2O95376 493 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 IGHDP01880 384 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 FGRP09769 529 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 PDHBP11177 359 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 TOP1P11387 765 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 NOVP48745 357 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 RPS6P62753 249 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 PURAQ00577 322 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 PDE4DQ08499 809 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ALX1Q15699 326 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 LY6KQ17RY6 165 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 DUSP28Q4G0W2 176 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 PSRC1Q6PGN9 363 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 BTNL9Q6UXG8 535 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 RNF207Q6ZRF8 634 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 MFSD6Q6ZSS7 791 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 SEPT14Q6ZU15 432 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 TMCO2Q7Z6W1 182 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 TBC1D10CQ8IV04 446 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 RPUSD2Q8IZ73 545 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 MORC4Q8TE76 937 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 DCAF4Q8WV16 495 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ZFP91Q96JP5 570 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 NECAB3Q96P71 396 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 FTOQ9C0B1 505 aaKnown RBP eCLIP4.52□□□□□ -1.69
NUP85-209ENST00000578987 ALDH8A1Q9H2A2 487 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 SLC28A3Q9HAS3 691 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 VTA1Q9NP79 307 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 GPHNQ9NQX3 736 aaPredicted RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 ZSWIM5Q9P217 1185 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 ADD3Q9UEY8 706 aaKnown RBP4.52□□□□□ -1.69
NUP85-209ENST00000578987 SYNPO2Q9UMS6 1093 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 Q9Y3F1 56 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 SLC4A7Q9Y6M7 1214 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 REV3LO60673 3130 aa4.52□□□□□ -1.69
NUP85-209ENST00000578987 MICAL3Q7RTP6 2002 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 SIP14410 1827 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TNKSO95271 1327 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 ATG2AQ2TAZ0 1938 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TMEM265A0A087WTH1 108 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 EPOPA6NHQ4 379 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 B4E1Z4 1266 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TNFRSF10AO00220 468 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 ZNF213O14771 459 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 CABYRO75952 493 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 IQCF3P0C7M6 154 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TXNP10599 105 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 ATP2A2P16615 1042 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 SDSP20132 328 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 COL9A1P20849 921 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 KCNQ1P51787 676 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 RRP1P56182 461 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 MRPS5P82675 430 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 TFF2Q03403 129 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 ZNF543Q08ER8 600 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 SKIV2LQ15477 1246 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 RAB30Q15771 203 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TCTN1Q2MV58 587 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TJAP1Q5JTD0 557 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 AKNAD1Q5T1N1 836 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 ADGRF4Q8IZF3 695 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 SYMPKQ92797 1274 aaKnown RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 TTC14Q96N46 770 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 ASB2Q96Q27 587 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 MTG1Q9BT17 334 aaPredicted RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 ALG1Q9BT22 464 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 BCAS3Q9H6U6 928 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 TCP11L1Q9NUJ3 509 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 POLR3EQ9NVU0 708 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 COL20A1Q9P218 1284 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 VCANP13611 3396 aa4.51□□□□□ -1.69
NUP85-209ENST00000578987 COL4A4P53420 1690 aaPredicted RBP4.51□□□□□ -1.69
NUP85-209ENST00000578987 WDR81Q562E7 1941 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 NEDD4P46934 1319 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 CCDC171Q6TFL3 1326 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 DHX16O60231 1041 aaKnown RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 KDM4AO75164 1064 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 CENPBP07199 599 aaPredicted RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 CA3P07451 260 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 SUPT20HL2P0C7V6 817 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 MYCLP12524 364 aaPredicted RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 CPT1AP50416 773 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 ZNF200P98182 395 aaPredicted RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 C1QBPQ07021 282 aaKnown RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 GPNMBQ14956 572 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PPP2R5BQ15173 497 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PTGISQ16647 500 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 TMEM67Q5HYA8 995 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PPP4R3BQ5MIZ7 849 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PPP2R2DQ66LE6 453 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 GDF6Q6KF10 455 aaPredicted RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 FAM117BQ6P1L5 589 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms