RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 USP17L24Q0WX57 530 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 EZH2Q15910 746 aaKnown RBP0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 KRTAP13-3Q3SY46 172 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 NOM1Q5C9Z4 860 aaKnown RBP0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 HLA-DQA1Q5Y7H0 255 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ZNF425Q6IV72 752 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 LLGL2Q6P1M3 1020 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 Q6ZPA2 131 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 GPR155Q7Z3F1 870 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 SLCO6A1Q86UG4 719 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 PDZD3Q86UT5 571 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ARHGEF25Q86VW2 580 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 FAM200AQ8TCP9 573 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 STK35Q8TDR2 534 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 RNF141Q8WVD5 230 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 CPA5Q8WXQ8 436 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 NEIL1Q96FI4 390 aaPredicted RBP0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 PLPPR2Q96GM1 343 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 C1QTNF7Q9BXJ2 289 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 PDLIM7Q9NR12 457 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ARHGAP20Q9P2F6 1191 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ZNF70Q9UC06 446 aaPredicted RBP0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ERRFI1Q9UJM3 462 aaPredicted RBP0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 TRAK1Q9UPV9 953 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 ZNF521Q96K83 1311 aa0.79□□□□□ -2.28
SNORA40.17-201ENST00000517256 IGKV6D-41A0A0C4DH26 115 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TMEM238LA0A1B0GVL6 79 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TMEM82A0PJX8 343 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 PRSS47A8MTI9 375 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 INSIG1O15503 277 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 FAM20BO75063 409 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 DKK1O94907 266 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TRIM37O94972 964 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 ZBTB7AO95365 584 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 CNOT4O95628 575 aaKnown RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 C8BP07358 591 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 AZU1P20160 251 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 CCKARP32238 428 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 CAP2P40123 477 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 KRTAP10-1P60331 282 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 PTPN12Q05209 780 aaKnown RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TRIM26Q12899 539 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 WIPI1Q5MNZ9 446 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 PKN3Q6P5Z2 889 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 GSG1LQ6UXU4 331 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TMPRSS6Q8IU80 811 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 LCORLQ8N3X6 602 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 D2HGDHQ8N465 521 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 ZNF655Q8N720 491 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 ACRBPQ8NEB7 543 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 DBF4BQ8NFT6 615 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 ENOX1Q8TC92 643 aaKnown RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 GRIN3AQ8TCU5 1115 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 SYTL5Q8TDW5 730 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 SLC25A43Q8WUT9 341 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 KREMEN1Q96MU8 473 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 FAM193BQ96PV7 902 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 SYT3Q9BQG1 590 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TOR3AQ9H497 397 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 POLIQ9UNA4 740 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 ICKQ9UPZ9 632 aa0.78□□□□□ -2.28
SNORA40.17-201ENST00000517256 TADA3O75528 432 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NEFLP07196 543 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 ZNF28P17035 718 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 CR2P20023 1033 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NR4A1P22736 598 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 USP5P45974 858 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 CLK3P49761 638 aaKnown RBP0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 PLCD1P51178 756 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 ITGA1P56199 1179 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NKX3-2P78367 333 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 PDE4BQ07343 736 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 FOXF2Q12947 444 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 INPP5AQ14642 412 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 ZNF260Q3ZCT1 412 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 SLC44A4Q53GD3 710 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 OTUD3Q5T2D3 398 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 GFI1BQ5VTD9 330 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NBPF6Q5VWK0 638 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 DIEXFQ68CQ4 756 aaKnown RBP0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 SLC6A19Q695T7 634 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 SCARA3Q6AZY7 606 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 TMPRSS12Q86WS5 348 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 GALNT12Q8IXK2 581 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 DNAJC5GQ8N7S2 189 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 DAGLBQ8NCG7 672 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 LINC00116Q8NCU8 138 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 BEND2Q8NDZ0 799 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 FAM13CQ8NE31 585 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 CCDC74AQ96AQ1 378 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 TSPAN17Q96FV3 270 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 TMEM87BQ96K49 555 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NBPF4Q96M43 638 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 YTHDC1Q96MU7 727 aaKnown RBP0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 DPYSL5Q9BPU6 564 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 ALG2Q9H553 416 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 SYNPO2LQ9H987 977 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 NPHS2Q9NP85 383 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 AP5S1Q9NUS5 200 aa0.77□□□□□ -2.29
SNORA40.17-201ENST00000517256 ERVK13-1Q9NX77 482 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms