RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PPP4CP60510 307 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 TRIM14Q14142 442 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 MYOCDQ8IZQ8 938 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 MYMKA6NI61 221 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 SP4Q02446 784 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 E2F4Q16254 413 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 AOC3Q16853 763 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 NT5DC1Q5TFE4 455 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 IFIH1Q9BYX4 1025 aaKnown RBP13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
SLC13A3-201ENST00000279027 TJP1Q07157 1748 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 TADA3O75528 432 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 GH2P01242 217 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 CSRNP1Q96S65 589 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 RABEP2Q9H5N1 569 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 NUP98P52948 1817 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 QRICH1Q2TAL8 776 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 CCDC51Q96ER9 411 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 TACC1O75410 805 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 LSM14BQ9BX40 385 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 JMJD4Q9H9V9 463 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 AK8Q96MA6 479 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
SLC13A3-201ENST00000279027 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 LRP6O75581 1613 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 CLIC2O15247 247 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 C21orf2O43822 256 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 PDE6BP35913 854 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 LIMA1Q9UHB6 759 aaKnown RBP13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 ABCC6O95255 1503 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 LAD1O00515 517 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 GCNT3O95395 438 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 RHBDL3P58872 404 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 RASSF7Q02833 373 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 TAF3Q5VWG9 929 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 ACBD3Q9H3P7 528 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
SLC13A3-201ENST00000279027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 12.6
SLC13A3-201ENST00000279027 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 SORBS3O60504 671 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 GSPT2Q8IYD1 628 aaKnown RBP13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 ZBTB5O15062 677 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 MOCS3O95396 460 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms