RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
LRP3-203ENST00000590278 NBR1Q14596 966 aa20■□□□□ 0.79
LRP3-203ENST00000590278 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
LRP3-203ENST00000590278 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
LRP3-203ENST00000590278 SAMD9Q5K651 1589 aa19.97■□□□□ 0.79
LRP3-203ENST00000590278 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
LRP3-203ENST00000590278 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
LRP3-203ENST00000590278 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
LRP3-203ENST00000590278 ERICH6BQ5W0A0 696 aa19.95■□□□□ 0.78
LRP3-203ENST00000590278 KDM2AQ9Y2K7 1162 aa19.93■□□□□ 0.78
LRP3-203ENST00000590278 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
LRP3-203ENST00000590278 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
LRP3-203ENST00000590278 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
LRP3-203ENST00000590278 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
LRP3-203ENST00000590278 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
LRP3-203ENST00000590278 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
LRP3-203ENST00000590278 FBLN2P98095 1184 aa19.89■□□□□ 0.77
LRP3-203ENST00000590278 PKD2Q13563 968 aa19.88■□□□□ 0.77
LRP3-203ENST00000590278 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
LRP3-203ENST00000590278 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
LRP3-203ENST00000590278 TCOF1Q13428 1488 aaKnown RBP19.88■□□□□ 0.77
LRP3-203ENST00000590278 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
LRP3-203ENST00000590278 DAPK1P53355 1430 aa19.87■□□□□ 0.77
LRP3-203ENST00000590278 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
LRP3-203ENST00000590278 RPRD2Q5VT52 1461 aaKnown RBP19.86■□□□□ 0.77
LRP3-203ENST00000590278 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
LRP3-203ENST00000590278 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
LRP3-203ENST00000590278 USP47Q96K76 1375 aa19.84■□□□□ 0.77
LRP3-203ENST00000590278 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
LRP3-203ENST00000590278 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
LRP3-203ENST00000590278 GCC2Q8IWJ2 1684 aa19.84■□□□□ 0.77
LRP3-203ENST00000590278 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
LRP3-203ENST00000590278 ABCC5O15440 1437 aa19.83■□□□□ 0.77
LRP3-203ENST00000590278 PAK3O75914 559 aaPredicted RBP19.83■□□□□ 0.77
LRP3-203ENST00000590278 DEKP35659 375 aaKnown RBP19.82■□□□□ 0.76
LRP3-203ENST00000590278 ANP32AP39687 249 aaKnown RBP19.81■□□□□ 0.76
LRP3-203ENST00000590278 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
LRP3-203ENST00000590278 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
LRP3-203ENST00000590278 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
LRP3-203ENST00000590278 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
LRP3-203ENST00000590278 ST20-MTHFSA0A0A6YYL1 179 aa19.75■□□□□ 0.75
LRP3-203ENST00000590278 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
LRP3-203ENST00000590278 ROCK1Q13464 1354 aa19.74■□□□□ 0.75
LRP3-203ENST00000590278 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
LRP3-203ENST00000590278 SMG6Q86US8 1419 aaKnown RBP19.73■□□□□ 0.75
LRP3-203ENST00000590278 WDR62O43379 1518 aa19.72■□□□□ 0.75
LRP3-203ENST00000590278 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
LRP3-203ENST00000590278 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
LRP3-203ENST00000590278 PNISRQ8TF01 805 aaKnown RBP19.72■□□□□ 0.75
LRP3-203ENST00000590278 NUP155O75694 1391 aa19.71■□□□□ 0.75
LRP3-203ENST00000590278 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
LRP3-203ENST00000590278 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
LRP3-203ENST00000590278 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
LRP3-203ENST00000590278 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
LRP3-203ENST00000590278 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
LRP3-203ENST00000590278 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
LRP3-203ENST00000590278 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
LRP3-203ENST00000590278 PZPP20742 1482 aa19.66■□□□□ 0.74
LRP3-203ENST00000590278 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
LRP3-203ENST00000590278 IPO9Q96P70 1041 aaKnown RBP19.66■□□□□ 0.74
LRP3-203ENST00000590278 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
LRP3-203ENST00000590278 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
LRP3-203ENST00000590278 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
LRP3-203ENST00000590278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
LRP3-203ENST00000590278 MYT1LQ9UL68 1186 aa19.64■□□□□ 0.73
LRP3-203ENST00000590278 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
LRP3-203ENST00000590278 DNMT1P26358 1616 aaKnown RBP19.64■□□□□ 0.73
LRP3-203ENST00000590278 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
LRP3-203ENST00000590278 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
LRP3-203ENST00000590278 ANKRD50Q9ULJ7 1429 aa19.62■□□□□ 0.73
LRP3-203ENST00000590278 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
LRP3-203ENST00000590278 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
LRP3-203ENST00000590278 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
LRP3-203ENST00000590278 PBRM1Q86U86 1689 aa19.61■□□□□ 0.73
LRP3-203ENST00000590278 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
LRP3-203ENST00000590278 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
LRP3-203ENST00000590278 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
LRP3-203ENST00000590278 PLIN1O60240 522 aa19.6■□□□□ 0.73
LRP3-203ENST00000590278 RRP1P56182 461 aaKnown RBP19.6■□□□□ 0.73
LRP3-203ENST00000590278 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
LRP3-203ENST00000590278 ROCK2O75116 1388 aaKnown RBP19.6■□□□□ 0.73
LRP3-203ENST00000590278 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
LRP3-203ENST00000590278 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
LRP3-203ENST00000590278 CDCA7LQ96GN5 454 aa19.59■□□□□ 0.73
LRP3-203ENST00000590278 DISP1Q96F81 1524 aa19.58■□□□□ 0.72
LRP3-203ENST00000590278 SKAP1Q86WV1 359 aa19.57■□□□□ 0.72
LRP3-203ENST00000590278 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
LRP3-203ENST00000590278 RALBP1Q15311 655 aa19.56■□□□□ 0.72
LRP3-203ENST00000590278 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
LRP3-203ENST00000590278 RNF123Q5XPI4 1314 aa19.55■□□□□ 0.72
LRP3-203ENST00000590278 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
LRP3-203ENST00000590278 RAPGEF6Q8TEU7 1601 aa19.53■□□□□ 0.72
LRP3-203ENST00000590278 ARID4BQ4LE39 1312 aaPredicted RBP19.53■□□□□ 0.72
LRP3-203ENST00000590278 NBPF1Q3BBV0 1214 aa19.53■□□□□ 0.72
LRP3-203ENST00000590278 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
LRP3-203ENST00000590278 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
LRP3-203ENST00000590278 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
LRP3-203ENST00000590278 BRD4O60885 1362 aaPredicted RBP19.5■□□□□ 0.71
LRP3-203ENST00000590278 PDE4AP27815 886 aa19.5■□□□□ 0.71
LRP3-203ENST00000590278 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms