RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
SSX3-204ENST00000612497 PRKAG3Q9UGI9 489 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 FEM1BQ9UK73 627 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
SSX3-204ENST00000612497 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 TECTAO75443 2155 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 GFRA3O60609 400 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 MBD4O95243 580 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 CPT1AP50416 773 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 DEFB103AP81534 67 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 IER5LQ5T953 404 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 AACSQ86V21 672 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 ADHFE1Q8IWW8 467 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
SSX3-204ENST00000612497 ZFHX2Q9C0A1 2572 aaPredicted RBP12.33□□□□□ -0.44
SSX3-204ENST00000612497 MYO7AQ13402 2215 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 GOLIM4O00461 696 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 GJB5O95377 273 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 IRS1P35568 1242 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 PTPROQ16827 1216 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 DUSP28Q4G0W2 176 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 VTA1Q9NP79 307 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 MUTYHQ9UIF7 546 aa12.32□□□□□ -0.44
SSX3-204ENST00000612497 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 GREB1LQ9C091 1923 aaPredicted RBP12.32□□□□□ -0.44
SSX3-204ENST00000612497 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
SSX3-204ENST00000612497 TRIM27P14373 513 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
SSX3-204ENST00000612497 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 TRERF1Q96PN7 1200 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
SSX3-204ENST00000612497 PRRX2Q99811 253 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 TNNQ9UQP3 1299 aa12.31□□□□□ -0.44
SSX3-204ENST00000612497 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 ALAS1P13196 640 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
SSX3-204ENST00000612497 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
SSX3-204ENST00000612497 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
SSX3-204ENST00000612497 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 PBXIP1Q96AQ6 731 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
SSX3-204ENST00000612497 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
SSX3-204ENST00000612497 FDX1P10109 184 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 TCF15Q12870 199 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
SSX3-204ENST00000612497 IKBKEQ14164 716 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 GPNMBQ14956 572 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 PTGISQ16647 500 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 TKFCQ3LXA3 575 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 TCEAL5Q5H9L2 206 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
SSX3-204ENST00000612497 CAGE1Q8TC20 777 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 AFAP1L1Q8TED9 768 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 FRAT1Q92837 279 aaPredicted RBP12.29□□□□□ -0.44
SSX3-204ENST00000612497 EDAQ92838 391 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
SSX3-204ENST00000612497 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
SSX3-204ENST00000612497 FAM86C1Q9NVL1 165 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 CLDND1Q9NY35 253 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 LCTP09848 1927 aa12.29□□□□□ -0.44
SSX3-204ENST00000612497 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 KPNA6O60684 536 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 EFCAB14O75071 495 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 BMP3P12645 472 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 SELPP16109 830 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 RASA1P20936 1047 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 ADD2P35612 726 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 PKN1Q16512 942 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 NSMFQ6X4W1 530 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 LRRC8DQ7L1W4 858 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 BMP8AQ7Z5Y6 402 aa12.28□□□□□ -0.44
SSX3-204ENST00000612497 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
SSX3-204ENST00000612497 CYP39A1Q9NYL5 469 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms