RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.63□□□□□ -1.03
TPM4-210ENST00000588507 STK25O00506 426 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 DYNC1LI2O43237 492 aaPredicted RBP8.62□□□□□ -1.03
TPM4-210ENST00000588507 CSPG5O95196 566 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 GLP2RO95838 553 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 MCAMP43121 646 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 TBC1D8BQ0IIM8 1120 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 FAM47CQ5HY64 1035 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.62□□□□□ -1.036e-8■□□□□ 9.1
TPM4-210ENST00000588507 ZNF467Q7Z7K2 595 aaPredicted RBP8.62□□□□□ -1.03
TPM4-210ENST00000588507 TLK2Q86UE8 772 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 METTL16Q86W50 562 aaKnown RBP8.62□□□□□ -1.03
TPM4-210ENST00000588507 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 MYOCDQ8IZQ8 938 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 MAGEB6Q8N7X4 407 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 ACER1Q8TDN7 264 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
TPM4-210ENST00000588507 DNAJC18Q9H819 358 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 TSHZ2Q9NRE2 1034 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 GMEB2Q9UKD1 530 aa8.62□□□□□ -1.03
TPM4-210ENST00000588507 SMG5Q9UPR3 1016 aaKnown RBP8.62□□□□□ -1.03
TPM4-210ENST00000588507 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 MYH13Q9UKX3 1938 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.61□□□□□ -1.03
TPM4-210ENST00000588507 MMP1P03956 469 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 SELPP16109 830 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 BMPR1AP36894 532 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 NRIP1P48552 1158 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 TMEM132BQ14DG7 1078 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 IL31Q6EBC2 164 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 RIOX2Q8IUF8 465 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 CAGE1Q8TC20 777 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 DDX11Q96FC9 970 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 BBC3Q96PG8 261 aaPredicted RBP8.61□□□□□ -1.03
TPM4-210ENST00000588507 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 FBXL21Q9UKT6 434 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 GNEQ9Y223 722 aaKnown RBP8.61□□□□□ -1.03
TPM4-210ENST00000588507 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
TPM4-210ENST00000588507 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 NLRC5Q86WI3 1866 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
TPM4-210ENST00000588507 ARHGAP6O43182 974 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 MAP3K13O43283 966 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 NBNO60934 754 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 ASGR2P07307 311 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
TPM4-210ENST00000588507 COPB2P35606 906 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 NEUROD2Q15784 382 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 LRRC8DQ7L1W4 858 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 ADGRD2Q7Z7M1 963 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 SIX5Q8N196 739 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 VGLL2Q8N8G2 317 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 ATRIPQ8WXE1 791 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
TPM4-210ENST00000588507 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 RWDD3Q9Y3V2 267 aa8.6□□□□□ -1.03
TPM4-210ENST00000588507 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
TPM4-210ENST00000588507 MICAL3Q7RTP6 2002 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 C2CD4DB7Z1M9 353 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 TBC1D4O60343 1298 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 FLOT1O75955 427 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 FGFR2P21802 821 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 RFX1P22670 979 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 STAT3P40763 770 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 PUM3Q15397 648 aaKnown RBP8.59□□□□□ -1.03
TPM4-210ENST00000588507 ZNF528Q3MIS6 628 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 RBM23Q86U06 439 aaKnown RBP8.59□□□□□ -1.03
TPM4-210ENST00000588507 FIBCD1Q8N539 461 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 LINS1Q8NG48 757 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 NEK1Q96PY6 1258 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 S1PR5Q9H228 398 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 EPC1Q9H2F5 836 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 Q9Y3F1 56 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 CACNA1IQ9P0X4 2223 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 DOPEY1Q5JWR5 2465 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 ITPR1Q14643 2758 aa8.59□□□□□ -1.03
TPM4-210ENST00000588507 DNAJC25-GNG10A0A024R161 153 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 PPP2R1AP30153 589 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 TMPOP42166 694 aaKnown RBP8.58□□□□□ -1.04
TPM4-210ENST00000588507 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
TPM4-210ENST00000588507 CAMK1Q14012 370 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 LRRC24Q50LG9 513 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 SPECC1Q5M775 1068 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 SPTY2D1Q68D10 685 aaPredicted RBP8.58□□□□□ -1.04
TPM4-210ENST00000588507 NFRKBQ6P4R8 1299 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 C19orf48Q6RUI8 117 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 ARMCX2Q7L311 632 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 TEX11Q8IYF3 940 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 GATA6Q92908 595 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 TOP1MTQ969P6 601 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 KATNBL1Q9H079 304 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 ABCF2Q9UG63 623 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms