RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 ZNF605Q86T29 641 aa12.54□□□□□ -0.4
NIFKP4-201ENST00000567275 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
NIFKP4-201ENST00000567275 CYB5RLQ6IPT4 315 aa12.53□□□□□ -0.4
NIFKP4-201ENST00000567275 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
NIFKP4-201ENST00000567275 COPS5Q92905 334 aa12.53□□□□□ -0.4
NIFKP4-201ENST00000567275 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
NIFKP4-201ENST00000567275 CHD1O14646 1710 aa12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 SDHBP21912 280 aa12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 HOXC12P31275 282 aa12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 MVKQ03426 396 aa12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.41
NIFKP4-201ENST00000567275 THBDP07204 575 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 SNRPB2P08579 225 aaKnown RBP12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 PLS3P13797 630 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 KCNJ6P48051 423 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
NIFKP4-201ENST00000567275 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 CCDC85CA6NKD9 419 aa12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 MPOP05164 745 aa12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 CORO7P57737 925 aa12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 RAD54L2Q9Y4B4 1467 aa12.5□□□□□ -0.41
NIFKP4-201ENST00000567275 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 ECI1P42126 302 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 RBL2Q08999 1139 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 PKN1Q16512 942 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 SYDE1Q6ZW31 735 aaPredicted RBP12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 CCDC140Q96MF4 163 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 SLC26A8Q96RN1 970 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
NIFKP4-201ENST00000567275 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
NIFKP4-201ENST00000567275 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
NIFKP4-201ENST00000567275 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
NIFKP4-201ENST00000567275 NLGN2Q8NFZ4 835 aa12.48□□□□□ -0.41
NIFKP4-201ENST00000567275 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 CPP00450 1065 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 TACR1P25103 407 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 HSP90AA2PQ14568 343 aaPredicted RBP12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 BICRALQ6AI39 1079 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 TMEM132EQ6IEE7 984 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 MMP19Q99542 508 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 TNFRSF12AQ9NP84 129 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
NIFKP4-201ENST00000567275 NUDT19A8MXV4 375 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 PDPK1O15530 556 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 NPHS1O60500 1241 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 SF1Q15637 639 aaKnown RBP12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 FRS2Q8WU20 508 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 PPP1R16BQ96T49 567 aa12.46□□□□□ -0.41
NIFKP4-201ENST00000567275 CUX1P39880 1505 aa12.46□□□□□ -0.42
NIFKP4-201ENST00000567275 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
NIFKP4-201ENST00000567275 C8AP07357 584 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 RBM10P98175 930 aaKnown RBP12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 TMEM62Q0P6H9 643 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 PRSS53Q2L4Q9 553 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 OLFML2BQ68BL8 750 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 IQCEQ6IPM2 695 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 NPLOC4Q8TAT6 608 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 RWDD3Q9Y3V2 267 aa12.45□□□□□ -0.42
NIFKP4-201ENST00000567275 C7orf72A4D263 438 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 ABLIM1O14639 778 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 PEX10O60683 326 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 SCG5P05408 212 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 GFRA1P56159 465 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 CYP4F3Q08477 520 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 LZTR1Q8N653 840 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 KCNN1Q92952 543 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 MCOLN1Q9GZU1 580 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 GULP1Q9UBP9 304 aa12.44□□□□□ -0.42
NIFKP4-201ENST00000567275 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 GRIA2P42262 883 aa12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 E4F1Q66K89 784 aaPredicted RBP12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 CABP7Q86V35 215 aa12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 USP33Q8TEY7 942 aa12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 ZNF669Q96BR6 464 aaPredicted RBP12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 AARSD1Q9BTE6 412 aaKnown RBP12.43□□□□□ -0.42
NIFKP4-201ENST00000567275 HRKO00198 91 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 NFIBO00712 420 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 SERINC3Q13530 473 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms