RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MAP2K7O14733 419 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 PSMA7O14818 248 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 ADAMTS3O15072 1205 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 KLRC4O43908 158 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 UBXN1Q04323 297 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 SOGA3Q5TF21 947 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 ZNF444Q8N0Y2 327 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-213ENST00000566756 SLC35F6Q8N357 371 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 ZNF507Q8TCN5 953 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 MYH8P13535 1937 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-213ENST00000566756 ERLIN1O75477 346 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 SMARCA1P28370 1054 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 UBA7P41226 1012 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 CRKP46108 304 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 SMC1AQ14683 1233 aaKnown RBP18.79■□□□□ 0.6
CMTM3-213ENST00000566756 LONRF2Q1L5Z9 754 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 APOBEC3HQ6NTF7 200 aaKnown RBP18.79■□□□□ 0.6
CMTM3-213ENST00000566756 RETREG2Q8NC44 543 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 HAUS4Q9H6D7 363 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
CMTM3-213ENST00000566756 EPN1Q9Y6I3 576 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-213ENST00000566756 STXBP3O00186 592 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 PPIP5K2O43314 1243 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 POLD1P28340 1107 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 DNM2P50570 870 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 COBLL1Q53SF7 1204 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 ACRBPQ8NEB7 543 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 GPKOWQ92917 476 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CMTM3-213ENST00000566756 CCDC47Q96A33 483 aaKnown RBP18.78■□□□□ 0.6
CMTM3-213ENST00000566756 NUP58Q9BVL2 599 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 EPC1Q9H2F5 836 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 ANKZF1Q9H8Y5 726 aa18.78■□□□□ 0.6
CMTM3-213ENST00000566756 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-213ENST00000566756 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CMTM3-213ENST00000566756 NDUFA10O95299 355 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 RASA1P20936 1047 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 CDK8P49336 464 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 SCNN1DP51172 638 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 TYW1BQ6NUM6 668 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 KRT25Q7Z3Z0 450 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 IQCDQ96DY2 449 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 ZMYND12Q9H0C1 365 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
CMTM3-213ENST00000566756 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
CMTM3-213ENST00000566756 A0A0U1RQJ8 604 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 RNF225M0QZC1 329 aaPredicted RBP18.77■□□□□ 0.59
CMTM3-213ENST00000566756 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.59
CMTM3-213ENST00000566756 AMPD2Q01433 879 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 TTI2Q6NXR4 508 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 CDC42EP5Q6NZY7 148 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 ATRIPQ8WXE1 791 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 PIM2Q9P1W9 311 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 MAGEC2Q9UBF1 373 aaPredicted RBP18.77■□□□□ 0.59
CMTM3-213ENST00000566756 SERPINA10Q9UK55 444 aa18.77■□□□□ 0.59
CMTM3-213ENST00000566756 BICDL2A1A5D9 508 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 CTAGE15A4D2H0 777 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 ZBTB7AO95365 584 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 CTAGE8P0CG41 777 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 TSPY3P0CV98 308 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 TSPY8P0CW00 308 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 MEA1Q16626 185 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 TSR1Q2NL82 804 aaKnown RBP18.76■□□□□ 0.59
CMTM3-213ENST00000566756 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 CTAGE6Q86UF2 777 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 FAM114A1Q8IWE2 563 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 CTAGE4Q8IX94 777 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 TMEM60Q9H2L4 133 aa18.76■□□□□ 0.59
CMTM3-213ENST00000566756 TTC26A0AVF1 554 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 YDJCA8MPS7 323 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 PSMD14O00487 310 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 CYTH3O43739 400 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
CMTM3-213ENST00000566756 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
CMTM3-213ENST00000566756 GPS2Q13227 327 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 BEND6Q5SZJ8 279 aaPredicted RBP18.75■□□□□ 0.59
CMTM3-213ENST00000566756 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 EHBP1Q8NDI1 1231 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 MYO3BQ8WXR4 1341 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 BAZ2BQ9UIF8 2168 aaKnown RBP18.75■□□□□ 0.59
CMTM3-213ENST00000566756 CDC25AP30304 524 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 KRT83P78385 493 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 GABPAQ06546 454 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 SLC35G1Q2M3R5 365 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 HDXQ7Z353 690 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 RASSF8Q8NHQ8 419 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 NEDD1Q8NHV4 660 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 TRIM47Q96LD4 638 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 C7orf25Q9BPX7 421 aa18.75■□□□□ 0.59
CMTM3-213ENST00000566756 DDX4Q9NQI0 724 aaKnown RBP18.75■□□□□ 0.59
CMTM3-213ENST00000566756 MYO6Q9UM54 1294 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms