RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TNKSO95271 1327 aa21.47■■□□□ 1.03
USB1-213ENST00000566292 LOC102724159A0A0B4J2E5 919 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 CALML3P27482 149 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 RPS6P62753 249 aaKnown RBP21.46■■□□□ 1.03
USB1-213ENST00000566292 FPGSQ05932 587 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 PWP2Q15269 919 aaKnown RBP21.46■■□□□ 1.03
USB1-213ENST00000566292 KIAA1211Q6ZU35 1233 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 AP5M1Q9H0R1 490 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 Q9Y3F1 56 aa21.46■■□□□ 1.03
USB1-213ENST00000566292 TIMP1P01033 207 aa21.45■■□□□ 1.02
USB1-213ENST00000566292 USH1GQ495M9 461 aa21.45■■□□□ 1.02
USB1-213ENST00000566292 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
USB1-213ENST00000566292 KRT23Q9C075 422 aa21.45■■□□□ 1.02
USB1-213ENST00000566292 STXBP5LQ9Y2K9 1186 aa21.45■■□□□ 1.02
USB1-213ENST00000566292 RBM47A0AV96 593 aaKnown RBP21.44■■□□□ 1.02
USB1-213ENST00000566292 CDC37Q16543 378 aaPredicted RBP21.44■■□□□ 1.02
USB1-213ENST00000566292 DUSP28Q4G0W2 176 aa21.44■■□□□ 1.02
USB1-213ENST00000566292 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
USB1-213ENST00000566292 CNNM2Q9H8M5 875 aa21.44■■□□□ 1.02
USB1-213ENST00000566292 GRIN2DO15399 1336 aa21.44■■□□□ 1.02
USB1-213ENST00000566292 RAD50Q92878 1312 aa21.44■■□□□ 1.02
USB1-213ENST00000566292 CABYRO75952 493 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 CD4P01730 458 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 EDNRBP24530 442 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 CHMLP26374 656 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 ASPRV1Q53RT3 343 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 RNPC3Q96LT9 517 aaKnown RBP21.43■■□□□ 1.02
USB1-213ENST00000566292 FAM161BQ96MY7 647 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 GUCD1Q96NT3 240 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 WDR11Q9BZH6 1224 aa21.43■■□□□ 1.02
USB1-213ENST00000566292 ZEB2O60315 1214 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 SMAD3P84022 425 aaKnown RBP21.42■■□□□ 1.02
USB1-213ENST00000566292 PTH1RQ03431 593 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 KIAA1217Q5T5P2 1943 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 MFSD5Q6N075 450 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 CYB5R4Q7L1T6 521 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 DNERQ8NFT8 737 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 TBC1D5Q92609 795 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 UBAC1Q9BSL1 405 aa21.42■■□□□ 1.02
USB1-213ENST00000566292 TLR3O15455 904 aaKnown RBP21.41■■□□□ 1.02
USB1-213ENST00000566292 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
USB1-213ENST00000566292 PSMC6P62333 389 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 ITGA7Q13683 1181 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 SEC23AQ15436 765 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 ZNF697Q5TEC3 545 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 SLC17A8Q8NDX2 589 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 RGS22Q8NE09 1264 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 PPP1R12CQ9BZL4 782 aa21.41■■□□□ 1.02
USB1-213ENST00000566292 ABCB11O95342 1321 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 SCN10AQ9Y5Y9 1956 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 PDE4DQ08499 809 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 IFIT1BQ5T764 474 aaKnown RBP21.4■■□□□ 1.02
USB1-213ENST00000566292 C16orf59Q7L2K0 433 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 STAG2Q8N3U4 1231 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.4■■□□□ 1.02
USB1-213ENST00000566292 JMJD4Q9H9V9 463 aa21.4■■□□□ 1.02
USB1-213ENST00000566292 BAZ2BQ9UIF8 2168 aaKnown RBP21.39■■□□□ 1.01
USB1-213ENST00000566292 CYP21A2P08686 494 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 CSF2RAP15509 400 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 PPIGQ13427 754 aaKnown RBP eCLIP21.39■■□□□ 1.011e-8■□□□□ 8.5
USB1-213ENST00000566292 RUFY2Q8WXA3 655 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 VAT1LQ9HCJ6 419 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 COL20A1Q9P218 1284 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 TAF6LQ9Y6J9 622 aa21.39■■□□□ 1.01
USB1-213ENST00000566292 CYP2C18P33260 490 aa21.38■■□□□ 1.01
USB1-213ENST00000566292 OR6J1Q8NGC5 347 aa21.38■■□□□ 1.01
USB1-213ENST00000566292 SYTL5Q8TDW5 730 aaPredicted RBP21.38■■□□□ 1.01
USB1-213ENST00000566292 COPS5Q92905 334 aa21.38■■□□□ 1.01
USB1-213ENST00000566292 TAAR1Q96RJ0 339 aa21.38■■□□□ 1.01
USB1-213ENST00000566292 MPHOSPH6Q99547 160 aaKnown RBP21.38■■□□□ 1.01
USB1-213ENST00000566292 TTYH1Q9H313 450 aaPredicted RBP21.38■■□□□ 1.01
USB1-213ENST00000566292 SEMA6BQ9H3T3 888 aa21.38■■□□□ 1.01
USB1-213ENST00000566292 UMODL1Q5DID0 1318 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 SGSM2O43147 1006 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 DHX16O60231 1041 aaKnown RBP21.37■■□□□ 1.01
USB1-213ENST00000566292 B4GALT4O60513 344 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 PURAQ00577 322 aaKnown RBP21.37■■□□□ 1.01
USB1-213ENST00000566292 PPP2R5BQ15173 497 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 TMEM240Q5SV17 173 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 FBXO11Q86XK2 927 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 TMEM199Q8N511 208 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 SCFD2Q8WU76 684 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 SEZ6LQ9BYH1 1024 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 MAF1Q9H063 256 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 TRPV6Q9H1D0 765 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 POLR3EQ9NVU0 708 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 MAD2L2Q9UI95 211 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 U3KPZ7 1027 aaPredicted RBP21.37■■□□□ 1.01
USB1-213ENST00000566292 CDH23Q9H251 3354 aa21.37■■□□□ 1.01
USB1-213ENST00000566292 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
USB1-213ENST00000566292 ARIH2O95376 493 aa21.36■■□□□ 1.01
USB1-213ENST00000566292 MYL3P08590 195 aa21.36■■□□□ 1.01
USB1-213ENST00000566292 CPT1AP50416 773 aa21.36■■□□□ 1.01
USB1-213ENST00000566292 HIPK3Q9H422 1215 aa21.36■■□□□ 1.01
USB1-213ENST00000566292 MRPL11Q9Y3B7 192 aaKnown RBP21.36■■□□□ 1.01
USB1-213ENST00000566292 PALM3A6NDB9 673 aaPredicted RBP21.35■■□□□ 1.01
USB1-213ENST00000566292 B4DLN1 442 aa21.35■■□□□ 1.01
USB1-213ENST00000566292 KLRF2D3W0D1 207 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms