RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
SPIDR-224ENST00000524126 MAST3O60307 1309 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 CCT8L1PA6NM43 557 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 SRRM3A6NNA2 597 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 M0R2C6 588 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 GRM8O00222 908 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 FERP16591 822 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 KRT83P78385 493 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 HHATQ5VTY9 493 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 ELOA2Q8IYF1 753 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 KBTBD3Q8NAB2 608 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 ALS2CR12Q96Q35 445 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 HAUS7Q99871 368 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 CHCHD3Q9NX63 227 aaKnown RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 COL16A1Q07092 1604 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 B4DLN1 442 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 H7C1W4 665 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 SEMA3EO15041 775 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 IL2RBP14784 551 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 PTPREP23469 700 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 TNFRSF8P28908 595 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 KLK7P49862 253 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM14Q14142 442 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 IFT20Q8IY31 132 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 MDM1Q8TC05 714 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 TBC1D5Q92609 795 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 RUBCNQ92622 972 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 PURBQ96QR8 312 aaKnown RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 NHEJ1Q9H9Q4 299 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 LRRC4CQ9HCJ2 640 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 RGL1Q9NZL6 768 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 MAPK8IP1Q9UQF2 711 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
SPIDR-224ENST00000524126 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
SPIDR-224ENST00000524126 EP400Q96L91 3159 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 SH2B2O14492 632 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ZNF263O14978 683 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ALDH5A1P51649 535 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ANKRD20A3Q5VUR7 823 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ZNF572Q7Z3I7 529 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 DNAJC7Q99615 494 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 BLZF1Q9H2G9 400 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 BIN2Q9UBW5 565 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 MYH10P35580 1976 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 GOLGA6L10A6NI86 522 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 PLEKP08567 350 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 SCNN1BP51168 640 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 CABP4P57796 275 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 RRAGBQ5VZM2 374 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 MB21D2Q8IYB1 491 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-224ENST00000524126 ARFGAP2Q8N6H7 521 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 TEKT4Q8WW24 435 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 MYL10Q9BUA6 226 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 SLC12A4Q9UP95 1085 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
SPIDR-224ENST00000524126 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 PPFIA2O75334 1257 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 RNASE9P60153 205 aaKnown RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 MXRA7P84157 204 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 KIF5AQ12840 1032 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 RIPK1Q13546 671 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 PDIA6Q15084 440 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 TAF11Q15544 211 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 TMEM165Q9HC07 324 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
SPIDR-224ENST00000524126 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
SPIDR-224ENST00000524126 C4AP0C0L4 1744 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms