RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 CLGNO14967 610 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 CLSTN1O94985 981 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 OR52Z1P0C646 297 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 DGKHQ86XP1 1220 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 CALML4Q96GE6 196 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 NOC4LQ9BVI4 516 aaKnown RBP19.5■□□□□ 0.71
TRAM1-205ENST00000521425 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 TRIM65Q6PJ69 517 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 MIGA2Q7L4E1 593 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 NEK8Q86SG6 692 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
TRAM1-205ENST00000521425 ADD3Q9UEY8 706 aaKnown RBP19.5■□□□□ 0.71
TRAM1-205ENST00000521425 FHOD1Q9Y613 1164 aa19.5■□□□□ 0.71
TRAM1-205ENST00000521425 GTPBP6O43824 516 aaPredicted RBP19.49■□□□□ 0.71
TRAM1-205ENST00000521425 ZNF18P17022 549 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 SLC1A4P43007 532 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 TDRD12Q587J7 1177 aaKnown RBP19.49■□□□□ 0.71
TRAM1-205ENST00000521425 BARHL2Q9NY43 387 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 LUC7L2Q9Y383 392 aaKnown RBP19.49■□□□□ 0.71
TRAM1-205ENST00000521425 DOT1LQ8TEK3 1739 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 PLEKP08567 350 aaPredicted RBP19.49■□□□□ 0.71
TRAM1-205ENST00000521425 TTC31Q49AM3 519 aaPredicted RBP19.49■□□□□ 0.71
TRAM1-205ENST00000521425 ZNF287Q9HBT7 754 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 TCP11X2Q5H9J9 407 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 SERPINB13Q9UIV8 391 aa19.49■□□□□ 0.71
TRAM1-205ENST00000521425 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 IPO7O95373 1038 aaKnown RBP19.48■□□□□ 0.71
TRAM1-205ENST00000521425 GNAQP50148 359 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 NAALADL2Q58DX5 795 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 SEMA3EO15041 775 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 SORBS3O60504 671 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 RAD17O75943 681 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 GRM4Q14833 912 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 CCDC122Q5T0U0 273 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 ANKRD40Q6AI12 368 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 PDXDC2PQ6P474 469 aa19.48■□□□□ 0.71
TRAM1-205ENST00000521425 ZNF579Q8NAF0 562 aaKnown RBP19.48■□□□□ 0.71
TRAM1-205ENST00000521425 PSDA5PKW4 1024 aaPredicted RBP19.47■□□□□ 0.71
TRAM1-205ENST00000521425 DDX39AO00148 427 aaKnown RBP19.47■□□□□ 0.71
TRAM1-205ENST00000521425 CT47A1Q5JQC4 288 aaPredicted RBP19.47■□□□□ 0.71
TRAM1-205ENST00000521425 TNFRSF25Q93038 417 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 CCDC47Q96A33 483 aaKnown RBP19.47■□□□□ 0.71
TRAM1-205ENST00000521425 TUBGCP2Q9BSJ2 902 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 SMARCAL1Q9NZC9 954 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 ZBTB21Q9ULJ3 1066 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 GNA11P29992 359 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 ZNF76P36508 570 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 PSEN1P49768 467 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 ERVK-24P63145 666 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 SEPT2Q15019 361 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 TICAM2Q86XR7 235 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 E9PMD0 336 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 IBSPP21815 317 aaPredicted RBP19.47■□□□□ 0.71
TRAM1-205ENST00000521425 PRR16Q569H4 304 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 CCDC102AQ96A19 550 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 BCAS3Q9H6U6 928 aa19.47■□□□□ 0.71
TRAM1-205ENST00000521425 STX10O60499 249 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 MFAP3LO75121 409 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ERCC5P28715 1186 aaPredicted RBP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ADCY7P51828 1080 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 PPP2R5BQ15173 497 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 KCNK18Q7Z418 384 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ADGRG1Q9Y653 693 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 A0A1B0GTH6 734 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 TRAF5O00463 557 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 BMP15O95972 392 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 CCDC174Q6PII3 467 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 TMC4Q7Z404 712 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 TMEM139Q8IV31 216 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 GSPT2Q8IYD1 628 aaKnown RBP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ADGRF4Q8IZF3 695 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 PDHBP11177 359 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ATP2B4P23634 1241 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ZNF658Q5TYW1 1059 aaPredicted RBP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 CNOT6LQ96LI5 555 aaKnown RBP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 KIAA1024Q9UPX6 916 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 ZBTB12Q9Y330 459 aaPredicted RBP19.46■□□□□ 0.71
TRAM1-205ENST00000521425 PCDHA1Q9Y5I3 950 aa19.46■□□□□ 0.71
TRAM1-205ENST00000521425 AOC3Q16853 763 aa19.45■□□□□ 0.7
TRAM1-205ENST00000521425 C2CD5Q86YS7 1000 aa19.45■□□□□ 0.7
TRAM1-205ENST00000521425 NCAPGQ9BPX3 1015 aa19.45■□□□□ 0.7
TRAM1-205ENST00000521425 KIF2AO00139 706 aaPredicted RBP19.45■□□□□ 0.7
TRAM1-205ENST00000521425 RHBDL3P58872 404 aa19.45■□□□□ 0.7
TRAM1-205ENST00000521425 PDGFDQ9GZP0 370 aaPredicted RBP19.45■□□□□ 0.7
TRAM1-205ENST00000521425 HOMER2Q9NSB8 354 aa19.45■□□□□ 0.7
TRAM1-205ENST00000521425 CCDC40Q4G0X9 1142 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 CACNA2D4Q7Z3S7 1137 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 PSTPIP2Q9H939 334 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 SV2BQ7L1I2 683 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 ZNF185O15231 689 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 BUB1O43683 1085 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 CFBP00751 764 aa19.44■□□□□ 0.7
TRAM1-205ENST00000521425 LONP1P36776 959 aaKnown RBP19.44■□□□□ 0.7
TRAM1-205ENST00000521425 PABPC4Q13310 644 aaKnown RBP eCLIP19.44■□□□□ 0.76e-8■□□□□ 9.5
TRAM1-205ENST00000521425 KRT79Q5XKE5 535 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms