RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ZBTB21Q9ULJ3 1066 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 WNT10BO00744 389 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 SKILP12757 684 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 FBXO11Q86XK2 927 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 CCDC150Q8NCX0 1101 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 MYOZ2Q9NPC6 264 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 TMX2Q9Y320 296 aa29.91■■■□□ 2.38
COL13A1-210ENST00000517713 R3HCC1Q9Y3T6 440 aaKnown RBP29.91■■■□□ 2.38
COL13A1-210ENST00000517713 CCZ1BP86790 482 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 CCZ1P86791 482 aaPredicted RBP29.9■■■□□ 2.38
COL13A1-210ENST00000517713 TNIP1Q15025 636 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 NBPF9Q3BBW0 867 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 CDAN1Q8IWY9 1227 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 SPICE1Q8N0Z3 855 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 CALML4Q96GE6 196 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 NAP1L4Q99733 375 aaKnown RBP29.9■■■□□ 2.38
COL13A1-210ENST00000517713 LRWD1Q9UFC0 647 aa29.9■■■□□ 2.38
COL13A1-210ENST00000517713 DDX25Q9UHL0 483 aaKnown RBP29.9■■■□□ 2.38
COL13A1-210ENST00000517713 NFKBIEO00221 500 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 GCFC2P16383 781 aaKnown RBP29.89■■■□□ 2.38
COL13A1-210ENST00000517713 VSTM4Q8IW00 320 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 ACER1Q8TDN7 264 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 RAB34Q9BZG1 259 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 CTNND2Q9UQB3 1225 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 PDIA5Q14554 519 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 KCNB1Q14721 858 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 MIGA2Q7L4E1 593 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 GOPCQ9HD26 462 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 INTS13Q9NVM9 706 aa29.89■■■□□ 2.38
COL13A1-210ENST00000517713 ARMCX5Q6P1M9 558 aa29.88■■■□□ 2.37
COL13A1-210ENST00000517713 PGAP2Q9UHJ9 254 aa29.88■■■□□ 2.37
COL13A1-210ENST00000517713 MYH7BA7E2Y1 1941 aa29.88■■■□□ 2.37
COL13A1-210ENST00000517713 SEMA3FQ13275 785 aa29.88■■■□□ 2.37
COL13A1-210ENST00000517713 SHTN1A0MZ66 631 aa29.87■■■□□ 2.37
COL13A1-210ENST00000517713 MEIS2O14770 477 aa29.87■■■□□ 2.37
COL13A1-210ENST00000517713 ANO3Q9BYT9 981 aa29.87■■■□□ 2.37
COL13A1-210ENST00000517713 RWDD2AQ9UIY3 292 aa29.87■■■□□ 2.37
COL13A1-210ENST00000517713 PRR12Q9ULL5 1215 aa29.87■■■□□ 2.37
COL13A1-210ENST00000517713 KLRC4O43908 158 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 SFPQP23246 707 aaKnown RBP eCLIP29.86■■■□□ 2.37
COL13A1-210ENST00000517713 MMP14P50281 582 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 AP3B2Q13367 1082 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 USH1GQ495M9 461 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 KMT5BQ4FZB7 885 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 KIAA1755Q5JYT7 1200 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 MCTP2Q6DN12 878 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 USP11P51784 963 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 STAT2P52630 851 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 CDKAL1Q5VV42 579 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 GDAQ9Y2T3 454 aa29.86■■■□□ 2.37
COL13A1-210ENST00000517713 CAP2P40123 477 aa29.85■■■□□ 2.37
COL13A1-210ENST00000517713 PAK1Q13153 545 aa29.85■■■□□ 2.37
COL13A1-210ENST00000517713 HAS1Q92839 578 aa29.85■■■□□ 2.37
COL13A1-210ENST00000517713 MAP3K10Q02779 954 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 GRB10Q13322 594 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 TPD52L1Q16890 204 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-210ENST00000517713 C7orf25Q9BPX7 421 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 BCS1LQ9Y276 419 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 RHOBTB3O94955 611 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 PRCPP42785 496 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 TERF1P54274 439 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 ZNF280AP59817 542 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-210ENST00000517713 AMPD3Q01432 767 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 NELFBQ8WX92 580 aa29.84■■■□□ 2.37
COL13A1-210ENST00000517713 POTEMA6NI47 508 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 MARCH6O60337 910 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 RPS12P25398 132 aaKnown RBP29.83■■■□□ 2.37
COL13A1-210ENST00000517713 R3HDM1Q15032 1099 aaKnown RBP29.83■■■□□ 2.37
COL13A1-210ENST00000517713 FAM83BQ5T0W9 1011 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 TRIM9Q9C026 710 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 CD2APQ9Y5K6 639 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 KRT79Q5XKE5 535 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 CDK5RAP3Q96JB5 506 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 PNMA5Q96PV4 448 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.83■■■□□ 2.37
COL13A1-210ENST00000517713 STK17AQ9UEE5 414 aa29.83■■■□□ 2.37
COL13A1-210ENST00000517713 CYP3A7-CYP3A51PA0A087WV96 503 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 A0A1B0GTH6 734 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 CYP3A7P24462 503 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 NR1I3Q14994 352 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 ADSSL1Q8N142 457 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 SH2D4AQ9H788 454 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 VCPKMTQ9H867 229 aa29.82■■■□□ 2.36
COL13A1-210ENST00000517713 PTPN21Q16825 1174 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 CCDC47Q96A33 483 aaKnown RBP29.81■■■□□ 2.36
COL13A1-210ENST00000517713 MAPK8IP1Q9UQF2 711 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 COBLO75128 1261 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 RASA3Q14644 834 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 SV2BQ7L1I2 683 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 APTXQ7Z2E3 356 aaKnown RBP29.81■■■□□ 2.36
COL13A1-210ENST00000517713 GIMAP8Q8ND71 665 aaPredicted RBP29.81■■■□□ 2.36
COL13A1-210ENST00000517713 SNX29Q8TEQ0 813 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 CTAGE1Q96RT6 745 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 PCDHA12Q9UN75 941 aa29.81■■■□□ 2.36
COL13A1-210ENST00000517713 NRDCO43847 1150 aa29.8■■■□□ 2.36
COL13A1-210ENST00000517713 FOSP01100 380 aaPredicted RBP29.8■■■□□ 2.36
COL13A1-210ENST00000517713 TRAF1Q13077 416 aa29.8■■■□□ 2.36
COL13A1-210ENST00000517713 MOXD1Q6UVY6 613 aa29.8■■■□□ 2.36
COL13A1-210ENST00000517713 CRYGNQ8WXF5 182 aa29.8■■■□□ 2.36
COL13A1-210ENST00000517713 MBOAT7Q96N66 472 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms