RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CCDC148Q8NFR7 591 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
LIME1-208ENST00000493265 CLEC4DQ8WXI8 215 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 TBC1D5Q92609 795 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 MROH8Q9H579 483 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 CEP290O15078 2479 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 CTGFP29279 349 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 HOXA13P31271 388 aaPredicted RBP19.75■□□□□ 0.75
LIME1-208ENST00000493265 COPB2P35606 906 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 ADCY7P51828 1080 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 KRT40Q6A162 431 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 PPP1R18Q6NYC8 613 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 ANKRD35Q8N283 1001 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 PSTPIP2Q9H939 334 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 C6orf50Q9HD87 102 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 SH3GLB2Q9NR46 395 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 FBXO40Q9UH90 709 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 IVNS1ABPQ9Y6Y0 642 aa19.75■□□□□ 0.75
LIME1-208ENST00000493265 H3BQV1 296 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 OPLAHO14841 1288 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 CALML3P27482 149 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 MAPK4P31152 587 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 UBE2SQ16763 222 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 PLEKHH3Q7Z736 793 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 MCF2L2Q86YR7 1114 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 CUL5Q93034 780 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 MMP19Q99542 508 aa19.74■□□□□ 0.75
LIME1-208ENST00000493265 COLQQ9Y215 455 aaPredicted RBP19.74■□□□□ 0.75
LIME1-208ENST00000493265 MGAMO43451 1857 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
LIME1-208ENST00000493265 TNPO2O14787 897 aaKnown RBP19.73■□□□□ 0.75
LIME1-208ENST00000493265 ADAMTS3O15072 1205 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 GNRH1P01148 92 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 FCER1AP12319 257 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 PSMC4P43686 418 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 FXR1P51114 621 aaKnown RBP eCLIP19.73■□□□□ 0.75
LIME1-208ENST00000493265 PRMT2P55345 433 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 BAATQ14032 418 aaPredicted RBP19.73■□□□□ 0.75
LIME1-208ENST00000493265 KCTD2Q14681 263 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 MTFR1Q15390 333 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 SLC30A10Q6XR72 485 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 RNF207Q6ZRF8 634 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 GPR142Q7Z601 462 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 TRIM47Q96LD4 638 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 RIC8AQ9NPQ8 531 aa19.73■□□□□ 0.75
LIME1-208ENST00000493265 BIN2Q9UBW5 565 aaPredicted RBP19.73■□□□□ 0.75
LIME1-208ENST00000493265 GCOM1H8Y6P7 765 aaPredicted RBP19.72■□□□□ 0.75
LIME1-208ENST00000493265 PGK2P07205 417 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 POLR2MP0CAP2 368 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 MRPL12P52815 198 aaKnown RBP19.72■□□□□ 0.75
LIME1-208ENST00000493265 FCHSD1Q86WN1 690 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 RASGRP4Q8TDF6 673 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 IPO9Q96P70 1041 aaKnown RBP19.72■□□□□ 0.75
LIME1-208ENST00000493265 ZMYND12Q9H0C1 365 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 A1CFQ9NQ94 594 aaKnown RBP19.72■□□□□ 0.75
LIME1-208ENST00000493265 TMEM260Q9NX78 707 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 SRRDQ9UH36 339 aa19.72■□□□□ 0.75
LIME1-208ENST00000493265 H0YGN5 161 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 PDCP20941 246 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 SYT1P21579 422 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 GNA11P29992 359 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 FCGRTP55899 365 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 JAKMIP3Q5VZ66 844 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 MCTP1Q6DN14 999 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 FBXO18Q8NFZ0 1043 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 RAET1EQ8TD07 263 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 OXER1Q8TDS5 423 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 PURBQ96QR8 312 aaKnown RBP19.71■□□□□ 0.75
LIME1-208ENST00000493265 CYP39A1Q9NYL5 469 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
LIME1-208ENST00000493265 PLXNB2O15031 1838 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 ESYT2A0FGR8 921 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 MMP1P03956 469 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 PTPREP23469 700 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 KRT2P35908 639 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 RPS6P62753 249 aaKnown RBP19.7■□□□□ 0.74
LIME1-208ENST00000493265 GNL2Q13823 731 aaKnown RBP19.7■□□□□ 0.74
LIME1-208ENST00000493265 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
LIME1-208ENST00000493265 FOXD4L5Q5VV16 416 aaPredicted RBP19.7■□□□□ 0.74
LIME1-208ENST00000493265 BLIDQ8IZY5 108 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 BICD2Q8TD16 824 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 FOXD4L4Q8WXT5 416 aaPredicted RBP19.7■□□□□ 0.74
LIME1-208ENST00000493265 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 BRMS1Q9HCU9 246 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 PFASO15067 1338 aa19.7■□□□□ 0.74
LIME1-208ENST00000493265 POTEB2H3BUK9 544 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 MEIS2O14770 477 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 ADORA2AP29274 412 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 GRK4P32298 578 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 CNTN2Q02246 1040 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
LIME1-208ENST00000493265 REXO1Q8N1G1 1221 aaKnown RBP19.69■□□□□ 0.74
LIME1-208ENST00000493265 TRIOBPQ9H2D6 2365 aa19.69■□□□□ 0.74
LIME1-208ENST00000493265 SLC15A5A6NIM6 579 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 BTBD18B2RXH4 712 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 STRNO43815 780 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 HOXD10P28358 340 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms