RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 FAAP100Q0VG06 881 aa24.04■■□□□ 1.44
CLTA-208ENST00000493185 CDC37Q16543 378 aaPredicted RBP24.04■■□□□ 1.44
CLTA-208ENST00000493185 FSCN1Q16658 493 aaKnown RBP24.04■■□□□ 1.44
CLTA-208ENST00000493185 KIAA1211Q6ZU35 1233 aa24.04■■□□□ 1.44
CLTA-208ENST00000493185 DEFB123Q8N688 67 aa24.04■■□□□ 1.44
CLTA-208ENST00000493185 Q9Y3F1 56 aa24.04■■□□□ 1.44
CLTA-208ENST00000493185 U3KPZ7 1027 aaPredicted RBP24.04■■□□□ 1.44
CLTA-208ENST00000493185 DYNC1LI2O43237 492 aaPredicted RBP24.03■■□□□ 1.44
CLTA-208ENST00000493185 B4DLN1 442 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 ARVCFO00192 962 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 DHX16O60231 1041 aaKnown RBP24.02■■□□□ 1.44
CLTA-208ENST00000493185 CABYRO75952 493 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 ITGB8P26012 769 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 CDK7P50613 346 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 MRPL12P52815 198 aaKnown RBP24.02■■□□□ 1.44
CLTA-208ENST00000493185 SHHQ15465 462 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 ADGRF4Q8IZF3 695 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 DNERQ8NFT8 737 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 ABCB11O95342 1321 aa24.02■■□□□ 1.44
CLTA-208ENST00000493185 PTH1RQ03431 593 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 PDE4DQ08499 809 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 C9orf50Q5SZB4 431 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 CXCL17Q6UXB2 119 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 RGS22Q8NE09 1264 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 WDR11Q9BZH6 1224 aa24.01■■□□□ 1.43
CLTA-208ENST00000493185 TLR3O15455 904 aaKnown RBP24■■□□□ 1.43
CLTA-208ENST00000493185 FPGSQ05932 587 aa24■■□□□ 1.43
CLTA-208ENST00000493185 DUSP28Q4G0W2 176 aa24■■□□□ 1.43
CLTA-208ENST00000493185 Q7L0L9 218 aa24■■□□□ 1.43
CLTA-208ENST00000493185 CYB5R4Q7L1T6 521 aa24■■□□□ 1.43
CLTA-208ENST00000493185 MAF1Q9H063 256 aa24■■□□□ 1.43
CLTA-208ENST00000493185 TBX21Q9UL17 535 aa24■■□□□ 1.43
CLTA-208ENST00000493185 SGSM2O43147 1006 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 TIMP1P01033 207 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 CYP21A2P08686 494 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 PTGS1P23219 599 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 SEC23AQ15436 765 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 QRICH1Q2TAL8 776 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 RALYLQ86SE5 291 aaKnown RBP23.99■■□□□ 1.43
CLTA-208ENST00000493185 VAT1LQ9HCJ6 419 aa23.99■■□□□ 1.43
CLTA-208ENST00000493185 TMEM63BQ5T3F8 832 aa23.98■■□□□ 1.43
CLTA-208ENST00000493185 FBXO11Q86XK2 927 aa23.98■■□□□ 1.43
CLTA-208ENST00000493185 MCF2L2Q86YR7 1114 aa23.98■■□□□ 1.43
CLTA-208ENST00000493185 FAM126BQ8IXS8 530 aa23.98■■□□□ 1.43
CLTA-208ENST00000493185 MRPL11Q9Y3B7 192 aaKnown RBP23.98■■□□□ 1.43
CLTA-208ENST00000493185 LAMA2P24043 3122 aaKnown RBP23.98■■□□□ 1.43
CLTA-208ENST00000493185 RBM47A0AV96 593 aaKnown RBP23.97■■□□□ 1.43
CLTA-208ENST00000493185 ERICH2A1L162 156 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 EDNRBP24530 442 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 ITGA7Q13683 1181 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 SCFD2Q8WU76 684 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 SEZ6LQ9BYH1 1024 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 JMJD4Q9H9V9 463 aa23.97■■□□□ 1.43
CLTA-208ENST00000493185 IFIT3O14879 490 aaKnown RBP23.96■■□□□ 1.43
CLTA-208ENST00000493185 SART3Q15020 963 aaKnown RBP23.96■■□□□ 1.43
CLTA-208ENST00000493185 PPP2R5BQ15173 497 aa23.96■■□□□ 1.43
CLTA-208ENST00000493185 FAM109BQ6ICB4 259 aaPredicted RBP23.96■■□□□ 1.43
CLTA-208ENST00000493185 STAG2Q8N3U4 1231 aa23.96■■□□□ 1.43
CLTA-208ENST00000493185 OR6J1Q8NGC5 347 aa23.96■■□□□ 1.43
CLTA-208ENST00000493185 NCOA7Q8NI08 942 aa23.96■■□□□ 1.43
CLTA-208ENST00000493185 RNPC3Q96LT9 517 aaKnown RBP23.96■■□□□ 1.43
CLTA-208ENST00000493185 MTMR10Q9NXD2 777 aa23.96■■□□□ 1.43
CLTA-208ENST00000493185 KLRF2D3W0D1 207 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 E7EWF7 191 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 NKRFO15226 690 aaKnown RBP eCLIP23.95■■□□□ 1.42
CLTA-208ENST00000493185 CPT1AP50416 773 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 EPHB4P54760 987 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 BRDTQ58F21 947 aaPredicted RBP23.95■■□□□ 1.42
CLTA-208ENST00000493185 MFSD5Q6N075 450 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 SLC43A3Q8NBI5 491 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 POLR3EQ9NVU0 708 aa23.95■■□□□ 1.42
CLTA-208ENST00000493185 CD4P01730 458 aa23.94■■□□□ 1.42
CLTA-208ENST00000493185 SYTL5Q8TDW5 730 aaPredicted RBP23.94■■□□□ 1.42
CLTA-208ENST00000493185 NSUN6Q8TEA1 469 aaKnown RBP23.94■■□□□ 1.42
CLTA-208ENST00000493185 MAP4K1Q92918 833 aa23.94■■□□□ 1.42
CLTA-208ENST00000493185 AMNQ9BXJ7 453 aa23.94■■□□□ 1.42
CLTA-208ENST00000493185 MAD2L2Q9UI95 211 aa23.94■■□□□ 1.42
CLTA-208ENST00000493185 PALM3A6NDB9 673 aaPredicted RBP23.93■■□□□ 1.42
CLTA-208ENST00000493185 PPIGQ13427 754 aaKnown RBP eCLIP23.93■■□□□ 1.42
CLTA-208ENST00000493185 WTAPQ15007 396 aa23.93■■□□□ 1.42
CLTA-208ENST00000493185 ZNF697Q5TEC3 545 aa23.93■■□□□ 1.42
CLTA-208ENST00000493185 TMEM199Q8N511 208 aa23.93■■□□□ 1.42
CLTA-208ENST00000493185 TBC1D5Q92609 795 aa23.93■■□□□ 1.42
CLTA-208ENST00000493185 GPHNQ9NQX3 736 aaPredicted RBP23.93■■□□□ 1.42
CLTA-208ENST00000493185 RBM8AQ9Y5S9 174 aaKnown RBP23.93■■□□□ 1.42
CLTA-208ENST00000493185 GRIN2DO15399 1336 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 PSMC6P62333 389 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 SMAD3P84022 425 aaKnown RBP23.92■■□□□ 1.42
CLTA-208ENST00000493185 TTLL4Q14679 1199 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 GRM4Q14833 912 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 TAAR1Q96RJ0 339 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 RMDN3Q96TC7 470 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 PPP1R12CQ9BZL4 782 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 STXBP5LQ9Y2K9 1186 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 TAF6LQ9Y6J9 622 aa23.92■■□□□ 1.42
CLTA-208ENST00000493185 ZBTB5O15062 677 aa23.91■■□□□ 1.42
CLTA-208ENST00000493185 MYL3P08590 195 aa23.91■■□□□ 1.42
CLTA-208ENST00000493185 TXNP10599 105 aaKnown RBP23.91■■□□□ 1.42
CLTA-208ENST00000493185 TMEM67Q5HYA8 995 aa23.91■■□□□ 1.42
CLTA-208ENST00000493185 STOX1Q6ZVD7 989 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms