RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MORC4Q8TE76 937 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 NEK1Q96PY6 1258 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 PIGSQ96S52 555 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 TSEN34Q9BSV6 310 aaKnown RBP18.24■□□□□ 0.51
HDAC6-218ENST00000470942 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 VTA1Q9NP79 307 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 PDGFCQ9NRA1 345 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 B4DLN1 442 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 DDAH1O94760 285 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
HDAC6-218ENST00000470942 GJA9P57773 515 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 PDE4DQ08499 809 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 COL9A3Q14050 684 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-218ENST00000470942 KCNA10Q16322 511 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 KLHDC9Q8NEP7 349 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 DNERQ8NFT8 737 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 PIBF1Q8WXW3 757 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
HDAC6-218ENST00000470942 A0A1W2PQ45 241 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-218ENST00000470942 A0A1W2PQY0 241 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 MYADML2A6NDP7 307 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 CFBP00751 764 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 SMPD1P17405 629 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 KIF5BP33176 963 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 LIFRP42702 1097 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 ACLYP53396 1101 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 IRX5P78411 483 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-218ENST00000470942 SLC35G1Q2M3R5 365 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 RASEFQ8IZ41 740 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
HDAC6-218ENST00000470942 MAP3K14Q99558 947 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 MAF1Q9H063 256 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 AP5M1Q9H0R1 490 aa18.22■□□□□ 0.51
HDAC6-218ENST00000470942 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
HDAC6-218ENST00000470942 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
HDAC6-218ENST00000470942 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-218ENST00000470942 CYTH3O43739 400 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 PPP1R11O60927 126 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-218ENST00000470942 TRAF1Q13077 416 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 KRT32Q14532 448 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 TRIM60Q495X7 471 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 SYTL5Q8TDW5 730 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-218ENST00000470942 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 TAAR1Q96RJ0 339 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.51
HDAC6-218ENST00000470942 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 CALM1P0DP23 149 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 CALM2P0DP24 149 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 CALM3P0DP25 149 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 RXRAP19793 462 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 CST5P28325 142 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-218ENST00000470942 BEX3Q00994 111 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 TSGA10IPQ3SY00 556 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 CCSAPQ6IQ19 270 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-218ENST00000470942 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 TLK2Q86UE8 772 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 STARD7Q9NQZ5 370 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 GNEQ9Y223 722 aaKnown RBP18.2■□□□□ 0.5
HDAC6-218ENST00000470942 TRIOBPQ9H2D6 2365 aa18.2■□□□□ 0.5
HDAC6-218ENST00000470942 ASGR1P07306 291 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 PTGS1P23219 599 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 MAGEA10P43363 369 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-218ENST00000470942 GNAQP50148 359 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 SNX17Q15036 470 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
HDAC6-218ENST00000470942 NSUN6Q8TEA1 469 aaKnown RBP18.19■□□□□ 0.5
HDAC6-218ENST00000470942 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 GLT1D1Q96MS3 346 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 RMDN3Q96TC7 470 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 LZTS2Q9BRK4 669 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-218ENST00000470942 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
HDAC6-218ENST00000470942 REC8O95072 547 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 EDNRBP24530 442 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
HDAC6-218ENST00000470942 TLE2Q04725 743 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
HDAC6-218ENST00000470942 DUSP28Q4G0W2 176 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 C1orf53Q5VUE5 145 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 RRP36Q96EU6 259 aaKnown RBP18.18■□□□□ 0.5
HDAC6-218ENST00000470942 GDF15Q99988 308 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 SPZ1Q9BXG8 430 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 PRO3102Q9H379 93 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 Q9Y3F1 56 aa18.18■□□□□ 0.5
HDAC6-218ENST00000470942 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 OPLAHO14841 1288 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms