RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PSMC6P62333 389 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 TTBK2Q6IQ55 1244 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 OTOP2Q7RTS6 562 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
PRKDC-203ENST00000432581 SLC28A3Q9HAS3 691 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 PRDM6Q9NQX0 595 aa17.54■□□□□ 0.4
PRKDC-203ENST00000432581 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 NFIBO00712 420 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 FGAP02671 866 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 PFKMP08237 780 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 RRP12Q5JTH9 1297 aaKnown RBP17.53■□□□□ 0.4
PRKDC-203ENST00000432581 TMEM63BQ5T3F8 832 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
PRKDC-203ENST00000432581 PURBQ96QR8 312 aaKnown RBP17.53■□□□□ 0.4
PRKDC-203ENST00000432581 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
PRKDC-203ENST00000432581 WNT8AQ9H1J5 351 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
PRKDC-203ENST00000432581 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.4
PRKDC-203ENST00000432581 FRMPD2Q68DX3 1309 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-203ENST00000432581 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
PRKDC-203ENST00000432581 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
PRKDC-203ENST00000432581 PDE1AP54750 535 aa17.52■□□□□ 0.4
PRKDC-203ENST00000432581 BRDTQ58F21 947 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-203ENST00000432581 PPM1EQ8WY54 764 aa17.52■□□□□ 0.4
PRKDC-203ENST00000432581 GPCPD1Q9NPB8 672 aa17.52■□□□□ 0.4
PRKDC-203ENST00000432581 GPHNQ9NQX3 736 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-203ENST00000432581 RAD50Q92878 1312 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKDC-203ENST00000432581 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
PRKDC-203ENST00000432581 PDHBP11177 359 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 CALML3P27482 149 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 PURAQ00577 322 aaKnown RBP17.51■□□□□ 0.39
PRKDC-203ENST00000432581 RNF207Q6ZRF8 634 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 OR6J1Q8NGC5 347 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 TTC14Q96N46 770 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
PRKDC-203ENST00000432581 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
PRKDC-203ENST00000432581 YBX2Q9Y2T7 364 aaKnown RBP17.51■□□□□ 0.39
PRKDC-203ENST00000432581 TNKSO95271 1327 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 B4DLN1 442 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 MYL3P08590 195 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 IGFBP4P22692 258 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
PRKDC-203ENST00000432581 PDE4DQ08499 809 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 ADGRE1Q14246 886 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 SCLYQ96I15 445 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
PRKDC-203ENST00000432581 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
PRKDC-203ENST00000432581 TNFRSF10AO00220 468 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 KPNA6O60684 536 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 ATP2A2P16615 1042 aaKnown RBP17.49■□□□□ 0.39
PRKDC-203ENST00000432581 EDNRBP24530 442 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
PRKDC-203ENST00000432581 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 MFSD6Q6ZSS7 791 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
PRKDC-203ENST00000432581 CHD9Q3L8U1 2897 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 CYP2C9P11712 490 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 RFC2P35250 354 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 NT5C2P49902 561 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
PRKDC-203ENST00000432581 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
PRKDC-203ENST00000432581 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
PRKDC-203ENST00000432581 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
PRKDC-203ENST00000432581 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 VWCEQ96DN2 955 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 ASB2Q96Q27 587 aa17.48■□□□□ 0.39
PRKDC-203ENST00000432581 RNF41Q9H4P4 317 aaPredicted RBP17.48■□□□□ 0.39
PRKDC-203ENST00000432581 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 A6NJR5 290 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 ACTN1P12814 892 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 RABGGTBP53611 331 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 HAND2P61296 217 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 PTPN11Q06124 597 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 CCDC85BQ15834 202 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 NBPF20Q3BBV1 942 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 FAM47CQ5HY64 1035 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 ESR2Q92731 530 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 MAF1Q9H063 256 aa17.47■□□□□ 0.39
PRKDC-203ENST00000432581 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-203ENST00000432581 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms