RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 GALNT17Q6IS24 598 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 FASTKD5Q7L8L6 764 aaKnown RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 FAM177A1Q8N128 213 aaPredicted RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 CCDC12Q8WUD4 166 aaPredicted RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 CRYGNQ8WXF5 182 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 CUL5Q93034 780 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 RCOR1Q9UKL0 485 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 ELP1O95163 1332 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 TMEM88BA6NKF7 163 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 PDHXO00330 501 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ATP2A1O14983 1001 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ZBED4O75132 1171 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 CETPP11597 493 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 GTF2A2P52657 109 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 Q3C1V9 767 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ANO1Q5XXA6 986 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 SNRNP48Q6IEG0 339 aaKnown RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 LRSAM1Q6UWE0 723 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 SLC30A10Q6XR72 485 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 HOXC10Q9NYD6 342 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 BRCA2P51587 3418 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ABCB11O95342 1321 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 TESPA1A2RU30 521 aaPredicted RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 PIK3CDO00329 1044 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 CFBP00751 764 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 HSD17B4P51659 736 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 MRPL12P52815 198 aaKnown RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 IRX3P78415 501 aaPredicted RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 HTRA3P83110 453 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ZNF174Q15697 407 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 C4orf32Q8N8J7 132 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 TRERF1Q96PN7 1200 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 PAGR1Q9BTK6 254 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 TMEM60Q9H2L4 133 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
HPS4-204ENST00000422379 ABT1Q9ULW3 272 aaKnown RBP10.23□□□□□ -0.77
HPS4-204ENST00000422379 ASTN1O14525 1302 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 TDP2O95551 362 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 MARCKSP29966 332 aaPredicted RBP10.22□□□□□ -0.77
HPS4-204ENST00000422379 STAT3P40763 770 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 OAZ1P54368 228 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 GHRHRQ02643 423 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 FSTL1Q12841 308 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 IL17AQ16552 155 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 RILPL1Q5EBL4 403 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 TTC38Q5R3I4 469 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 CCDC183Q5T5S1 534 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 CYP4F22Q6NT55 531 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 FCHSD1Q86WN1 690 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 SPATA32Q96LK8 384 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 TEX13BQ9BXU2 312 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 SCAND2PQ9GZW5 306 aaPredicted RBP10.22□□□□□ -0.77
HPS4-204ENST00000422379 RBSNQ9H1K0 784 aa10.22□□□□□ -0.77
HPS4-204ENST00000422379 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
HPS4-204ENST00000422379 CCDC194A0A1B0GVG4 234 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 SLC37A4O43826 429 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 UBXN2AP68543 259 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 PLS1Q14651 629 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 SLC39A14Q15043 492 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 NONOQ15233 471 aaKnown RBP eCLIP10.21□□□□□ -0.77
HPS4-204ENST00000422379 AXDND1Q5T1B0 1012 aaPredicted RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 KRT25Q7Z3Z0 450 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 ANKRD23Q86SG2 305 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 IL31RAQ8NI17 732 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 BICD2Q8TD16 824 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 SYTL5Q8TDW5 730 aaPredicted RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 ZFP91Q96JP5 570 aaPredicted RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 ZNF396Q96N95 335 aaPredicted RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 CLIC6Q96NY7 704 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 MOV10L1Q9BXT6 1211 aaKnown RBP10.21□□□□□ -0.77
HPS4-204ENST00000422379 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 SPATC1LQ9H0A9 340 aa10.21□□□□□ -0.77
HPS4-204ENST00000422379 YEATS4O95619 227 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 FDX1P10109 184 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 MCM7P33993 719 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 LETM2Q2VYF4 491 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 CYP2W1Q8TAV3 490 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 GJA10Q969M2 543 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 PORCNQ9H237 461 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.78
HPS4-204ENST00000422379 FBXO2Q9UK22 296 aaPredicted RBP10.21□□□□□ -0.78
HPS4-204ENST00000422379 CFAP45Q9UL16 551 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 PCDHA7Q9UN72 937 aa10.21□□□□□ -0.78
HPS4-204ENST00000422379 ADGRA2Q96PE1 1338 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 GCOM1H8Y6P7 765 aaPredicted RBP10.2□□□□□ -0.78
HPS4-204ENST00000422379 SPTLC2O15270 562 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 AOC2O75106 756 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 POLR2MP0CAP2 368 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms