RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 PCDHGC3Q9UN70 934 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 PLIN4Q96Q06 1357 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 MYH8P13535 1937 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 ZNF213O14771 459 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 ZBED4O75132 1171 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 BMP3P12645 472 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 COPB2P35606 906 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 HAND2P61296 217 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 SKOR1P84550 965 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 AMHR2Q16671 573 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 RRP12Q5JTH9 1297 aaKnown RBP13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 NPLOC4Q8TAT6 608 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 DPF3Q92784 378 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 HTATIP2Q9BUP3 242 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 FLRT1Q9NZU1 646 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 ZNF214Q9UL59 606 aaPredicted RBP13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 TACC3Q9Y6A5 838 aa13.9□□□□□ -0.18
SMIM11A-201ENST00000399292 NMT2O60551 498 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 COBLO75128 1261 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 PCP11498 1178 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 MCCP23508 829 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 SPIRE2Q8WWL2 714 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 GMCL1Q96IK5 515 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 TEX13BQ9BXU2 312 aa13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-201ENST00000399292 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 J3QL48 77 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 CYP2C19P33261 490 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 SLC1A4P43007 532 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 NOVP48745 357 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 KCTD2Q14681 263 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 OLFML2BQ68BL8 750 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 CPXCR1Q8N123 301 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 PAWRQ96IZ0 340 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 MMP19Q99542 508 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 TCP11L1Q9NUJ3 509 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 GMPR2Q9P2T1 348 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
SMIM11A-201ENST00000399292 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 PLA2G6O60733 806 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 CNGA1P29973 690 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 STAT2P52630 851 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 TTC14Q96N46 770 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 DNAH12Q6ZR08 3092 aa13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-201ENST00000399292 RLFQ13129 1914 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 IGHA2P01877 340 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 NT5C2P49902 561 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 OAZ1P54368 228 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 IMMTQ16891 758 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 RUFY2Q8WXA3 655 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 ESR2Q92731 530 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 MAML3Q96JK9 1138 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 TMEM47Q9BQJ4 181 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 RAVER2Q9HCJ3 691 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 DIS3Q9Y2L1 958 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 RIPK3Q9Y572 518 aa13.86□□□□□ -0.19
SMIM11A-201ENST00000399292 MSCO60682 206 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 PGK2P07205 417 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 DCAF4Q8WV16 495 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 NR2E3Q9Y5X4 410 aa13.85□□□□□ -0.19
SMIM11A-201ENST00000399292 H0YGN5 161 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 CCDC178Q5BJE1 867 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 TRPV1Q8NER1 839 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 CHST13Q8NET6 341 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
SMIM11A-201ENST00000399292 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
SMIM11A-201ENST00000399292 CYBAP13498 195 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms