RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 LMNB1P20700 586 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 TBCCQ15814 346 aa17.82■□□□□ 0.44
RGP1-201ENST00000378078 ZNF668Q96K58 619 aaPredicted RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 NR1H4Q96RI1 486 aaPredicted RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 MRPL11Q9Y3B7 192 aaKnown RBP17.82■□□□□ 0.44
RGP1-201ENST00000378078 M0R2C6 588 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 CCDC157Q569K6 752 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 ARHGAP24Q8N264 748 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 SEPT8Q92599 483 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 GBP5Q96PP8 586 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 GARSP41250 739 aaKnown RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 KCTD2Q14681 263 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 RAB44Q7Z6P3 723 aaPredicted RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 QTRT2Q9H974 415 aaKnown RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 OAS2P29728 719 aaKnown RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 GCKRQ14397 625 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 TBK1Q9UHD2 729 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 SSTR3P32745 418 aaPredicted RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 KCNA1Q09470 495 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 MTERF2Q49AM1 385 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 PPWD1Q96BP3 646 aaKnown RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 HPS4Q9NQG7 708 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 TRPA1O75762 1119 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 STMN1P16949 149 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 YWHAHQ04917 246 aaPredicted RBP17.81■□□□□ 0.44
RGP1-201ENST00000378078 LRRC41Q15345 812 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 KCTD17Q8N5Z5 321 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 MROH5Q6ZUA9 1318 aa17.81■□□□□ 0.44
RGP1-201ENST00000378078 PTPREP23469 700 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 MYOCDQ8IZQ8 938 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 CSRNP1Q96S65 589 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
RGP1-201ENST00000378078 PDE1BQ01064 536 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 FAM49AQ9H0Q0 323 aaPredicted RBP17.8■□□□□ 0.44
RGP1-201ENST00000378078 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 ELF1P32519 619 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 DCAF4L1Q3SXM0 396 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 ANXA13P27216 316 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 RASSF2P50749 326 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 PAK2Q13177 524 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 FLT4P35916 1363 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 KCTD6Q8NC69 237 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 KIAA1024Q9UPX6 916 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
RGP1-201ENST00000378078 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 RASSF7Q02833 373 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 NSD2O96028 1365 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 VAMP4O75379 141 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 IP6K1Q92551 441 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 PABPC4Q13310 644 aaKnown RBP eCLIP17.79■□□□□ 0.44
RGP1-201ENST00000378078 ANKRD13CQ8N6S4 541 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 RAB17Q9H0T7 212 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 USP19O94966 1318 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 IL16Q14005 1332 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 HNRNPDLO14979 420 aaKnown RBP17.79■□□□□ 0.44
RGP1-201ENST00000378078 PPFIA4O75335 1185 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 THOC5Q13769 683 aaKnown RBP17.79■□□□□ 0.44
RGP1-201ENST00000378078 NRBP2Q9NSY0 501 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 TOM1L1O75674 476 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 HADHAP40939 763 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 DCAF15Q66K64 600 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 P3H4Q92791 437 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 ZWILCHQ9H900 591 aa17.79■□□□□ 0.44
RGP1-201ENST00000378078 AFF4Q9UHB7 1163 aaKnown RBP17.79■□□□□ 0.44
RGP1-201ENST00000378078 VCPP55072 806 aaKnown RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 SCHIP1Q9P0W5 487 aaPredicted RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 IFNAR2P48551 515 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 PDZD4Q76G19 769 aaPredicted RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 TMCO5AQ8N6Q1 288 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 SARS2Q9NP81 518 aaKnown RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 CCDC38Q502W7 563 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 KCTD16Q68DU8 428 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 SBNO1A3KN83 1393 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 TRPM2O94759 1503 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 ZMYND10O75800 440 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 OCM2P0CE71 109 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 OCMP0CE72 109 aaPredicted RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 BLIDQ8IZY5 108 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 DEPDC1BQ8WUY9 529 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 HEXIM2Q96MH2 286 aaKnown RBP17.78■□□□□ 0.44
RGP1-201ENST00000378078 KLRF2D3W0D1 207 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 RPGRIP1Q96KN7 1286 aa17.78■□□□□ 0.44
RGP1-201ENST00000378078 RNF8O76064 485 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 TMED2Q15363 201 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 RUFY4Q6ZNE9 571 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms