RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CASTP20810 708 aaKnown RBP25.63■■□□□ 1.69
SNX3-202ENST00000349379 ALDH5A1P51649 535 aaPredicted RBP25.63■■□□□ 1.69
SNX3-202ENST00000349379 ACVR2BQ13705 512 aa25.63■■□□□ 1.69
SNX3-202ENST00000349379 Q6ZUG5 572 aa25.63■■□□□ 1.69
SNX3-202ENST00000349379 TMTC3Q6ZXV5 915 aa25.63■■□□□ 1.69
SNX3-202ENST00000349379 DIS3LQ8TF46 1054 aaKnown RBP25.63■■□□□ 1.69
SNX3-202ENST00000349379 TBC1D5Q92609 795 aa25.63■■□□□ 1.69
SNX3-202ENST00000349379 NID2Q14112 1375 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 AKR1A1P14550 325 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 CALML3P27482 149 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 TRAF1Q13077 416 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 SYNE3Q6ZMZ3 975 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 MCF2L2Q86YR7 1114 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 DNERQ8NFT8 737 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 PAWRQ96IZ0 340 aaKnown RBP25.62■■□□□ 1.69
SNX3-202ENST00000349379 PCDHA1Q9Y5I3 950 aa25.62■■□□□ 1.69
SNX3-202ENST00000349379 KLF18A0A0U1RQI7 1052 aa25.61■■□□□ 1.69
SNX3-202ENST00000349379 ZBTB43O43298 467 aa25.61■■□□□ 1.69
SNX3-202ENST00000349379 ANO1Q5XXA6 986 aa25.61■■□□□ 1.69
SNX3-202ENST00000349379 RUFY3Q7L099 469 aa25.61■■□□□ 1.69
SNX3-202ENST00000349379 SYTL5Q8TDW5 730 aaPredicted RBP25.61■■□□□ 1.69
SNX3-202ENST00000349379 RBM28Q9NW13 759 aaKnown RBP25.61■■□□□ 1.69
SNX3-202ENST00000349379 ZHX1Q9UKY1 873 aaPredicted RBP25.61■■□□□ 1.69
SNX3-202ENST00000349379 DDX49Q9Y6V7 483 aaKnown RBP25.61■■□□□ 1.69
SNX3-202ENST00000349379 EIF5BO60841 1220 aaKnown RBP25.6■■□□□ 1.69
SNX3-202ENST00000349379 COL6A1P12109 1028 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 EDNRBP24530 442 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 HSD17B4P51659 736 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 NECAB2Q7Z6G3 386 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 CMTR1Q8N1G2 835 aaKnown RBP25.6■■□□□ 1.69
SNX3-202ENST00000349379 IL17RAQ96F46 866 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 FAM217BQ9NTX9 383 aaPredicted RBP25.6■■□□□ 1.69
SNX3-202ENST00000349379 COL20A1Q9P218 1284 aa25.6■■□□□ 1.69
SNX3-202ENST00000349379 RARBP10826 455 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 EVCP57679 992 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 FUT2Q10981 343 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 SAMD3Q8N6K7 520 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 BRF1Q92994 677 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 RRP36Q96EU6 259 aaKnown RBP25.59■■□□□ 1.69
SNX3-202ENST00000349379 MAP3K20Q9NYL2 800 aaKnown RBP25.59■■□□□ 1.69
SNX3-202ENST00000349379 FAM184BQ9ULE4 1060 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 CNTNAP5Q8WYK1 1306 aa25.59■■□□□ 1.69
SNX3-202ENST00000349379 DNM1LO00429 736 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 ADCY6O43306 1168 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 ANAPC15P60006 121 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 FGD1P98174 961 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 APOBRQ0VD83 1088 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 RTN1Q16799 776 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 CCDC144BQ3MJ40 725 aa25.58■■□□□ 1.69
SNX3-202ENST00000349379 SEC24BO95487 1268 aa25.57■■□□□ 1.68
SNX3-202ENST00000349379 TAPT1Q6NXT6 567 aa25.57■■□□□ 1.68
SNX3-202ENST00000349379 ARRDC4Q8NCT1 418 aa25.57■■□□□ 1.68
SNX3-202ENST00000349379 LENG1Q96BZ8 264 aaPredicted RBP25.57■■□□□ 1.68
SNX3-202ENST00000349379 C11orf49Q9H6J7 331 aa25.57■■□□□ 1.68
SNX3-202ENST00000349379 VTA1Q9NP79 307 aa25.57■■□□□ 1.68
SNX3-202ENST00000349379 GOLGA8AA7E2F4 631 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 GOLGA8BA8MQT2 603 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 ADAMTS4O75173 837 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 DUSP11O75319 330 aaKnown RBP25.56■■□□□ 1.68
SNX3-202ENST00000349379 CFBP00751 764 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 CDC27P30260 824 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 TOB2Q14106 344 aaPredicted RBP25.56■■□□□ 1.68
SNX3-202ENST00000349379 PPP2R5BQ15173 497 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 LRRC41Q15345 812 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 C8orf34Q49A92 452 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 PIBF1Q8WXW3 757 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 TAAR1Q96RJ0 339 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 HTATIP2Q9BUP3 242 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 XPNPEP3Q9NQH7 507 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 SEC63Q9UGP8 760 aaKnown RBP25.56■■□□□ 1.68
SNX3-202ENST00000349379 CYP46A1Q9Y6A2 500 aa25.56■■□□□ 1.68
SNX3-202ENST00000349379 FBXO16Q8IX29 292 aaPredicted RBP25.55■■□□□ 1.68
SNX3-202ENST00000349379 RBM47A0AV96 593 aaKnown RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 NKX3-2P78367 333 aa25.54■■□□□ 1.68
SNX3-202ENST00000349379 GJC2Q5T442 439 aaPredicted RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 CCDC82Q8N4S0 544 aa25.54■■□□□ 1.68
SNX3-202ENST00000349379 NSUN6Q8TEA1 469 aaKnown RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 MPHOSPH6Q99547 160 aaKnown RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 UPF3BQ9BZI7 483 aaKnown RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 UPF3AQ9H1J1 476 aaKnown RBP25.54■■□□□ 1.68
SNX3-202ENST00000349379 SYNRGQ9UMZ2 1314 aa25.54■■□□□ 1.68
SNX3-202ENST00000349379 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.53■■□□□ 1.68
SNX3-202ENST00000349379 PGK1P00558 417 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 ADCYAP1R1P41586 468 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 METAP2P50579 478 aaKnown RBP eCLIP25.53■■□□□ 1.68
SNX3-202ENST00000349379 EEPD1Q7L9B9 569 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 KLHDC9Q8NEP7 349 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 RMDN3Q96TC7 470 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 PDGFCQ9NRA1 345 aa25.53■■□□□ 1.68
SNX3-202ENST00000349379 GNEQ9Y223 722 aaKnown RBP25.53■■□□□ 1.68
SNX3-202ENST00000349379 B4DLN1 442 aa25.52■■□□□ 1.68
SNX3-202ENST00000349379 MRPL12P52815 198 aaKnown RBP25.52■■□□□ 1.68
SNX3-202ENST00000349379 IQSEC1Q6DN90 963 aa25.52■■□□□ 1.68
SNX3-202ENST00000349379 IWS1Q96ST2 819 aa25.52■■□□□ 1.68
SNX3-202ENST00000349379 PXMP2Q9NR77 195 aa25.52■■□□□ 1.68
SNX3-202ENST00000349379 CCDC196A0A1B0GTZ2 297 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 hCG_1642624A0A1W2PR95 340 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 GCOM1H8Y6P7 765 aaPredicted RBP25.51■■□□□ 1.67
SNX3-202ENST00000349379 POLR2MP0CAP2 368 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 CST5P28325 142 aaPredicted RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms