RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 CCNE1P24864 410 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 GNA11P29992 359 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 CDK8P49336 464 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 WDR59Q6PJI9 974 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 RETREG2Q8NC44 543 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 ZSWIM4Q9H7M6 989 aa14.32□□□□□ -0.12
LINC00540-203ENST00000631321 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 BICDL2A1A5D9 508 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 PSMD14O00487 310 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 TUBBP07437 444 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 NAPAP54920 295 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 NFIXQ14938 502 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 TXNRD1Q16881 649 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 BEND6Q5SZJ8 279 aaPredicted RBP14.31□□□□□ -0.12
LINC00540-203ENST00000631321 P2RX5Q93086 422 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 EYA3Q99504 573 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 C6orf50Q9HD87 102 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.31□□□□□ -0.12
LINC00540-203ENST00000631321 CCNL1Q9UK58 526 aaPredicted RBP14.31□□□□□ -0.12
LINC00540-203ENST00000631321 NEK8Q86SG6 692 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 CCDC47Q96A33 483 aaKnown RBP14.31□□□□□ -0.12
LINC00540-203ENST00000631321 PNKPQ96T60 521 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
LINC00540-203ENST00000631321 SAP30BPQ9UHR5 308 aaKnown RBP14.31□□□□□ -0.12
LINC00540-203ENST00000631321 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CTAGE15A4D2H0 777 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CTAGE8P0CG41 777 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 OAS2P29728 719 aaKnown RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 BTDP43251 543 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 DDX60LQ5H9U9 1706 aaKnown RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CTAGE6Q86UF2 777 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CTAGE4Q8IX94 777 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CSGALNACT2Q8N6G5 542 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 PLIN2Q99541 437 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 TUBGCP2Q9BSJ2 902 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 EXOC1Q9NV70 894 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 MYO6Q9UM54 1294 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 CCDC66A2RUB6 948 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 IL1R1P14778 569 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 PLCG2P16885 1265 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 HERVK_113P62684 666 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 TSR1Q2NL82 804 aaKnown RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 LETM2Q2VYF4 491 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 FIGNQ5HY92 759 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 TRAPPC11Q7Z392 1133 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 FAM114A1Q8IWE2 563 aa14.3□□□□□ -0.12
LINC00540-203ENST00000631321 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 MMTAG2Q9BU76 263 aaKnown RBP14.3□□□□□ -0.12
LINC00540-203ENST00000631321 B4DLN1 442 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 CCNT1O60563 726 aaKnown RBP14.29□□□□□ -0.12
LINC00540-203ENST00000631321 ERLIN1O75477 346 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 AMPD3Q01432 767 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
LINC00540-203ENST00000631321 CD209Q9NNX6 404 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 RHBDL3P58872 404 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 KRT83P78385 493 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 GPSM2P81274 684 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 ZBED6P86452 979 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 CDK17Q00537 523 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 PDE4DQ08499 809 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 STK4Q13043 487 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 ANKRD40Q6AI12 368 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 TEX11Q8IYF3 940 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 CCDC170Q8IYT3 715 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 ERGIC2Q96RQ1 377 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 L1RE1Q9UN81 338 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 BTAF1O14981 1849 aa14.29□□□□□ -0.12
LINC00540-203ENST00000631321 A0A1W2PQJ5 194 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
LINC00540-203ENST00000631321 ATP2B4P23634 1241 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 PAPD7Q5XG87 772 aaKnown RBP14.28□□□□□ -0.12
LINC00540-203ENST00000631321 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 HDXQ7Z353 690 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 IQCDQ96DY2 449 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
LINC00540-203ENST00000631321 MTMR9Q96QG7 549 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
LINC00540-203ENST00000631321 MTMR7Q9Y216 660 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 PLIN4Q96Q06 1357 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 MYH8P13535 1937 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 GAKO14976 1311 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 NHSQ6T4R5 1651 aa14.28□□□□□ -0.12
LINC00540-203ENST00000631321 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.12
LINC00540-203ENST00000631321 RFC4P35249 363 aa14.27□□□□□ -0.12
LINC00540-203ENST00000631321 ASIC1P78348 528 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms