RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 DDX49Q9Y6V7 483 aaKnown RBP28.85■■■□□ 2.21
CDKN3-211ENST00000611205 PPIGQ13427 754 aaKnown RBP eCLIP28.84■■■□□ 2.21
CDKN3-211ENST00000611205 FAM126BQ8IXS8 530 aa28.84■■■□□ 2.21
CDKN3-211ENST00000611205 EVI5LQ96CN4 794 aa28.84■■■□□ 2.21
CDKN3-211ENST00000611205 TOMM22Q9NS69 142 aa28.84■■■□□ 2.21
CDKN3-211ENST00000611205 CCPG1Q9ULG6 757 aa28.84■■■□□ 2.21
CDKN3-211ENST00000611205 UNC80Q8N2C7 3258 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 DNAJB2P25686 324 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 NSMFQ6X4W1 530 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 EEPD1Q7L9B9 569 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 TLK2Q86UE8 772 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 ANAPC4Q9UJX5 808 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 ASTN1O14525 1302 aa28.83■■■□□ 2.21
CDKN3-211ENST00000611205 CSF2RAP15509 400 aa28.82■■■□□ 2.2
CDKN3-211ENST00000611205 CXCL17Q6UXB2 119 aa28.82■■■□□ 2.2
CDKN3-211ENST00000611205 TMEM199Q8N511 208 aa28.82■■■□□ 2.2
CDKN3-211ENST00000611205 AP5M1Q9H0R1 490 aa28.82■■■□□ 2.2
CDKN3-211ENST00000611205 CYP39A1Q9NYL5 469 aa28.82■■■□□ 2.2
CDKN3-211ENST00000611205 GNEQ9Y223 722 aaKnown RBP28.82■■■□□ 2.2
CDKN3-211ENST00000611205 PTGS1P23219 599 aa28.81■■■□□ 2.2
CDKN3-211ENST00000611205 NKX3-2P78367 333 aa28.81■■■□□ 2.2
CDKN3-211ENST00000611205 RRP12Q5JTH9 1297 aaKnown RBP28.81■■■□□ 2.2
CDKN3-211ENST00000611205 FBXO16Q8IX29 292 aaPredicted RBP28.81■■■□□ 2.2
CDKN3-211ENST00000611205 PDGFCQ9NRA1 345 aa28.81■■■□□ 2.2
CDKN3-211ENST00000611205 HELLSQ9NRZ9 838 aa28.81■■■□□ 2.2
CDKN3-211ENST00000611205 DYNC1LI2O43237 492 aaPredicted RBP28.8■■■□□ 2.2
CDKN3-211ENST00000611205 ORC4O43929 436 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 ACRP10323 421 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 SMPD1P17405 629 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 RRP1P56182 461 aaKnown RBP28.8■■■□□ 2.2
CDKN3-211ENST00000611205 FSCN1Q16658 493 aaKnown RBP28.8■■■□□ 2.2
CDKN3-211ENST00000611205 TMEM240Q5SV17 173 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 C16orf59Q7L2K0 433 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 DCAF4Q8WV16 495 aa28.8■■■□□ 2.2
CDKN3-211ENST00000611205 SLC16A2P36021 539 aa28.79■■■□□ 2.2
CDKN3-211ENST00000611205 GRIN2CQ14957 1233 aa28.79■■■□□ 2.2
CDKN3-211ENST00000611205 TTBK2Q6IQ55 1244 aa28.79■■■□□ 2.2
CDKN3-211ENST00000611205 TIFAQ96CG3 184 aa28.79■■■□□ 2.2
CDKN3-211ENST00000611205 PURBQ96QR8 312 aaKnown RBP28.79■■■□□ 2.2
CDKN3-211ENST00000611205 CABYRO75952 493 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 CD4P01730 458 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 ICAM1P05362 532 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 CYP2C18P33260 490 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 ZNF365Q70YC5 407 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 FAM227BQ96M60 508 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 CRBNQ96SW2 442 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 ZNF576Q9H609 170 aa28.78■■■□□ 2.2
CDKN3-211ENST00000611205 FRMPD2Q68DX3 1309 aaPredicted RBP28.77■■■□□ 2.2
CDKN3-211ENST00000611205 GBF1Q92538 1859 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 ZEB2O60315 1214 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 NOVP48745 357 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 PDE1AP54750 535 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 ITGA7Q13683 1181 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 ALX1Q15699 326 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 IQSEC1Q6DN90 963 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 TAPT1Q6NXT6 567 aa28.77■■■□□ 2.2
CDKN3-211ENST00000611205 PSRC1Q6PGN9 363 aaPredicted RBP28.77■■■□□ 2.2
CDKN3-211ENST00000611205 RANBP17Q9H2T7 1088 aaKnown RBP28.77■■■□□ 2.2
CDKN3-211ENST00000611205 A0A0D9SFI3 127 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 GRXCR1A8MXD5 290 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 FGAP02671 866 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 FGRP09769 529 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 MCMDC2Q4G0Z9 681 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 TMEM63BQ5T3F8 832 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 KIAA1211Q6ZU35 1233 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 TMEM47Q9BQJ4 181 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 VTA1Q9NP79 307 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 GPCPD1Q9NPB8 672 aa28.76■■■□□ 2.19
CDKN3-211ENST00000611205 TOP1P11387 765 aaKnown RBP28.75■■■□□ 2.19
CDKN3-211ENST00000611205 BAATQ14032 418 aaPredicted RBP28.75■■■□□ 2.19
CDKN3-211ENST00000611205 SYDE2Q5VT97 1194 aa28.75■■■□□ 2.19
CDKN3-211ENST00000611205 SLC43A3Q8NBI5 491 aa28.75■■■□□ 2.19
CDKN3-211ENST00000611205 PBX4Q9BYU1 374 aa28.75■■■□□ 2.19
CDKN3-211ENST00000611205 HIPK3Q9H422 1215 aa28.75■■■□□ 2.19
CDKN3-211ENST00000611205 MYO9BQ13459 2157 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 CDH23Q9H251 3354 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 PBX2P40425 430 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 BTNL9Q6UXG8 535 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 IL23AQ9NPF7 189 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 ADD3Q9UEY8 706 aaKnown RBP28.74■■■□□ 2.19
CDKN3-211ENST00000611205 Q9Y3F1 56 aa28.74■■■□□ 2.19
CDKN3-211ENST00000611205 UMODL1Q5DID0 1318 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 PTPDC1A2A3K4 754 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 NFIBO00712 420 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 HSPD1P10809 573 aaKnown RBP28.73■■■□□ 2.19
CDKN3-211ENST00000611205 ALDH5A1P51649 535 aaPredicted RBP28.73■■■□□ 2.19
CDKN3-211ENST00000611205 HAND2P61296 217 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 PSMC6P62333 389 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 RASIP1Q5U651 963 aa28.73■■■□□ 2.19
CDKN3-211ENST00000611205 EYSQ5T1H1 3165 aa28.72■■■□□ 2.19
CDKN3-211ENST00000611205 GRIN2DO15399 1336 aa28.72■■■□□ 2.19
CDKN3-211ENST00000611205 NMIQ13287 307 aaPredicted RBP28.72■■■□□ 2.19
CDKN3-211ENST00000611205 MORC4Q8TE76 937 aa28.72■■■□□ 2.19
CDKN3-211ENST00000611205 TRIM6-TRIM34B2RNG4 842 aa28.71■■■□□ 2.19
CDKN3-211ENST00000611205 B4GALT4O60513 344 aa28.71■■■□□ 2.19
CDKN3-211ENST00000611205 CCL23P55773 120 aa28.71■■■□□ 2.19
CDKN3-211ENST00000611205 ZNF589Q86UQ0 364 aaPredicted RBP28.71■■■□□ 2.19
CDKN3-211ENST00000611205 TRPV6Q9H1D0 765 aa28.71■■■□□ 2.19
CDKN3-211ENST00000611205 TCP11L1Q9NUJ3 509 aa28.71■■■□□ 2.19
CDKN3-211ENST00000611205 CALML3P27482 149 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms