RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ZNFX1Q9P2E3 1918 aaKnown RBP13.26□□□□□ -0.29
SMAD4-211ENST00000590499 VWA5AO00534 786 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
SMAD4-211ENST00000590499 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
SMAD4-211ENST00000590499 MYCP01106 439 aaPredicted RBP13.25□□□□□ -0.29
SMAD4-211ENST00000590499 CCL5P13501 91 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 EN2P19622 333 aaPredicted RBP13.25□□□□□ -0.29
SMAD4-211ENST00000590499 UBXN2AP68543 259 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 GRB14Q14449 540 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 TMEM132BQ14DG7 1078 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 TRIB2Q92519 343 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 UNC93B1Q9H1C4 597 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
SMAD4-211ENST00000590499 NEDD4P46934 1319 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 SLC15A5A6NIM6 579 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 RAD21O60216 631 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 HMGCRP04035 888 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 CYP2B6P20813 491 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 RGS2P41220 211 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 SKAP1Q86WV1 359 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
SMAD4-211ENST00000590499 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 APBA2Q99767 749 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 SLF1Q9BQI6 1058 aa13.24□□□□□ -0.29
SMAD4-211ENST00000590499 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
SMAD4-211ENST00000590499 ZNF213O14771 459 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 IGHA2P01877 340 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 GJB1P08034 283 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 HOXC6P09630 235 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 ERCC3P19447 782 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 TRIM32Q13049 653 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
SMAD4-211ENST00000590499 MAP3K21Q5TCX8 1036 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
SMAD4-211ENST00000590499 PAK6Q9NQU5 681 aaPredicted RBP13.23□□□□□ -0.29
SMAD4-211ENST00000590499 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
SMAD4-211ENST00000590499 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
SMAD4-211ENST00000590499 SGSM2O43147 1006 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 BMP3P12645 472 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 GJA8P48165 433 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 NT5C2P49902 561 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 CCL14Q16627 93 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 WDR78Q5VTH9 848 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 RASGRP2Q7LDG7 609 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
SMAD4-211ENST00000590499 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
SMAD4-211ENST00000590499 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 MROH8Q9H579 483 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 TOMM22Q9NS69 142 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 CTNNA3Q9UI47 895 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 PLXNA1Q9UIW2 1896 aa13.22□□□□□ -0.29
SMAD4-211ENST00000590499 CEP290O15078 2479 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 FRMPD3Q5JV73 1810 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 STRNO43815 780 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 PLA2G6O60733 806 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 SLC25A27O95847 323 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.29
SMAD4-211ENST00000590499 STAT3P40763 770 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 PTH1RQ03431 593 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 PLS1Q14651 629 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.29
SMAD4-211ENST00000590499 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 ABRAQ8N0Z2 381 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
SMAD4-211ENST00000590499 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
SMAD4-211ENST00000590499 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 SMCHD1A6NHR9 2005 aa13.21□□□□□ -0.29
SMAD4-211ENST00000590499 COBLO75128 1261 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
SMAD4-211ENST00000590499 MCCP23508 829 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 ADORA2AP29274 412 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 SLC1A4P43007 532 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 U2AF1L4Q8WU68 220 aaKnown RBP13.2□□□□□ -0.3
SMAD4-211ENST00000590499 ESR2Q92731 530 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 TTC14Q96N46 770 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 TEX13BQ9BXU2 312 aa13.2□□□□□ -0.3
SMAD4-211ENST00000590499 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMAD4-211ENST00000590499 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
SMAD4-211ENST00000590499 B4E1Z4 1266 aa13.19□□□□□ -0.3
SMAD4-211ENST00000590499 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
SMAD4-211ENST00000590499 KDM4AO75164 1064 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms