RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 KLRC3Q07444 240 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 POTEBQ6S5H4 581 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 SEZ6LQ9BYH1 1024 aa13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 RAVER2Q9HCJ3 691 aaKnown RBP13.48□□□□□ -0.25
SUPT4H1-203ENST00000579289 SCN10AQ9Y5Y9 1956 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 GTPBP6O43824 516 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 PFKMP08237 780 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 TLK2Q86UE8 772 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 PRPF38AQ8NAV1 312 aaKnown RBP13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 FBXL18Q96ME1 805 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 SPC25Q9HBM1 224 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 NYAP2Q9P242 653 aa13.47□□□□□ -0.25
SUPT4H1-203ENST00000579289 TANC1Q9C0D5 1861 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 DYNC1LI2O43237 492 aaPredicted RBP13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 IL9P15248 144 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 RASA1P20936 1047 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 ADD2P35612 726 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 CHST13Q8NET6 341 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 MKL1Q969V6 931 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 A1CFQ9NQ94 594 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 Q9Y3F1 56 aa13.46□□□□□ -0.25
SUPT4H1-203ENST00000579289 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 MBD4O95243 580 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 LEXMQ3ZCV2 418 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 GJD3Q8N144 294 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 PHOX2BQ99453 314 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
SUPT4H1-203ENST00000579289 DCHS1Q96JQ0 3298 aa13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 TNKSO95271 1327 aa13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 GOLIM4O00461 696 aa13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 OAZ1P54368 228 aa13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 OS9Q13438 667 aaPredicted RBP13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 AACSQ86V21 672 aa13.44□□□□□ -0.26
SUPT4H1-203ENST00000579289 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 RLBP1P12271 317 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
SUPT4H1-203ENST00000579289 RBM47A0AV96 593 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 ZBED4O75132 1171 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 RFC2P35250 354 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 IQSEC1Q6DN90 963 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 FBXO16Q8IX29 292 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 PUS7LQ9H0K6 701 aaKnown RBP13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 KCNH6Q9H252 994 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 IL1RAPL2Q9NP60 686 aa13.42□□□□□ -0.26
SUPT4H1-203ENST00000579289 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 ERVK-21P61565 698 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 WDR5P61964 334 aaKnown RBP13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 DUSP28Q4G0W2 176 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 MUM1L1Q5H9M0 696 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 TRAF7Q6Q0C0 670 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
SUPT4H1-203ENST00000579289 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 ASB14A6NK59 587 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 SLC4A3P48751 1232 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 DEFB103AP81534 67 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 NBPF20Q3BBV1 942 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 AP5M1Q9H0R1 490 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 ACAD9Q9H845 621 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 MTMR4Q9NYA4 1195 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 CLIP2Q9UDT6 1046 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
SUPT4H1-203ENST00000579289 SIP14410 1827 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms