RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PTPRT	O14522	1441 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	NCOA1	Q15788	1441 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	ITSN2	Q9NZM3	1697 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956		H0Y8X5	98 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	CD247	P20963	164 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	PCBP3	P57721	371 aa	Known RBP	7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	LINC00116	Q8NCU8	138 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	ADCY4	Q8NFM4	1077 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF408	Q9H9D4	720 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF281	Q9Y2X9	895 aa		7.87	□□□□□ -1.15
PSMC6-208	ENST00000554956	CDC42BPA	Q5VT25	1732 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	MTUS2	Q5JR59	1369 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	C3	P01024	1663 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	PREX1	Q8TCU6	1659 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	SSU72P8	A0A1W2PR75	194 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	EPHX1	P07099	455 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	AFM	P43652	599 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	ANKRD39	Q53RE8	183 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	NOL9	Q5SY16	702 aa	Known RBP	7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	KIAA1211L	Q6NV74	962 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	VHLL	Q6RSH7	139 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZSWIM9	Q86XI8	627 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	FIBCD1	Q8N539	461 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	SLC43A3	Q8NBI5	491 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	CCDC120	Q96HB5	630 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	KIRREL1	Q96J84	757 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	FGD4	Q96M96	766 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	G6PC3	Q9BUM1	346 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	KLHL25	Q9H0H3	589 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	C19orf44	Q9H6X5	657 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	SP110	Q9HB58	689 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	PRR13	Q9NZ81	148 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	A2M	P01023	1474 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	PTPRK	Q15262	1439 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	CNTLN	Q9NXG0	1405 aa		7.86	□□□□□ -1.15
PSMC6-208	ENST00000554956	LTBP4	Q8N2S1	1624 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956		B2RBV5	119 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	HPX	P02790	462 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ITGA4	P13612	1032 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZC3H6	P61129	1189 aa	Known RBP	7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	KCNMB1	Q16558	191 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	TIGD5	Q53EQ6	642 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	NAALADL2	Q58DX5	795 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ASIC4	Q96FT7	647 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZDHHC15	Q96MV8	337 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	NOL6	Q9H6R4	1146 aa	Known RBP	7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ACTR10	Q9NZ32	417 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	PRKAG3	Q9UGI9	489 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	SUSD2	Q9UGT4	822 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	RNF114	Q9Y508	228 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	FHOD1	Q9Y613	1164 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	NPAT	Q14207	1427 aa		7.85	□□□□□ -1.15
PSMC6-208	ENST00000554956	ATP7A	Q04656	1500 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	LOC105371045	A0A1W2PR82	267 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	PAX4	O43316	350 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	USP2	O75604	605 aa	Predicted RBP	7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF205	O95201	554 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	VAV1	P15498	845 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	BMP8B	P34820	402 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	PPP2R5D	Q14738	602 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	LARP1B	Q659C4	914 aa	Known RBP	7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	HEATR6	Q6AI08	1181 aa	Known RBP	7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	PDZD8	Q8NEN9	1154 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	LINC01599	Q8WXQ3	324 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	MYLIP	Q8WY64	445 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	DHX38	Q92620	1227 aa	Known RBP	7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	GML	Q99445	158 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZMYM5	Q9UJ78	669 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	PLXNC1	O60486	1568 aa		7.84	□□□□□ -1.15
PSMC6-208	ENST00000554956	ZNF503-AS2	A6NEH8	195 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	EFEMP2	O95967	443 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	GSN	P06396	782 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	RAC2	P15153	192 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	TCEAL1	Q15170	157 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	TNNI3K	Q59H18	835 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	RTP2	Q5QGT7	225 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	ABHD4	Q8TB40	342 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	MICAL1	Q8TDZ2	1067 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	HNRNPLL	Q8WVV9	542 aa	Known RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	SYTL4	Q96C24	671 aa	Predicted RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	LIN37	Q96GY3	246 aa	Predicted RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	MAP6	Q96JE9	813 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	CDADC1	Q9BWV3	514 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	KRTAP4-8	Q9BYQ9	185 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	AP5S1	Q9NUS5	200 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	CEP162	Q5TB80	1403 aa		7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	INO80	Q9ULG1	1556 aa	Predicted RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	DHX29	Q7Z478	1369 aa	Known RBP	7.83	□□□□□ -1.16
PSMC6-208	ENST00000554956	PLEKHH2	Q8IVE3	1493 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	CAMSAP1	Q5T5Y3	1602 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	KIF3B	O15066	747 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	GALK1	P51570	392 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	TIAM1	Q13009	1591 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	DUSP4	Q13115	394 aa		7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	ADAT2	Q7Z6V5	191 aa	Known RBP	7.82	□□□□□ -1.16
PSMC6-208	ENST00000554956	HHIPL1	Q96JK4	782 aa		7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms