RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PCSK9Q8NBP7 692 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 VTI1AQ96AJ9 217 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 GLT1D1Q96MS3 346 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 KATNBL1Q9H079 304 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 RANBP17Q9H2T7 1088 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 CYP39A1Q9NYL5 469 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 MYADML2A6NDP7 307 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 DCDC2CA8MYV0 355 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 ASGR1P07306 291 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 CLTBP09497 229 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 PDHBP11177 359 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 GJA9P57773 515 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 TNFAIP2Q03169 654 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 Q7L0L9 218 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 ANKRD33Q7Z3H0 272 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 TOX2Q96NM4 488 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 TMEM39AQ9NV64 488 aa10.48□□□□□ -0.73
COPB1-211ENST00000534234 DDX49Q9Y6V7 483 aaKnown RBP10.48□□□□□ -0.73
COPB1-211ENST00000534234 ELP1O95163 1332 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 NEDD4P46934 1319 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 PARP14Q460N5 1801 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
COPB1-211ENST00000534234 KDM4AO75164 1064 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 RAG1P15918 1043 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 ITGB8P26012 769 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 CST5P28325 142 aaPredicted RBP10.47□□□□□ -0.73
COPB1-211ENST00000534234 ZNF543Q08ER8 600 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
COPB1-211ENST00000534234 SHHQ15465 462 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 EEPD1Q7L9B9 569 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 DSCC1Q9BVC3 393 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 UPF3AQ9H1J1 476 aaKnown RBP10.47□□□□□ -0.73
COPB1-211ENST00000534234 CTNNA3Q9UI47 895 aa10.47□□□□□ -0.73
COPB1-211ENST00000534234 ASTN1O14525 1302 aa10.46□□□□□ -0.73
COPB1-211ENST00000534234 B4E1Z4 1266 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 NFIBO00712 420 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 KIAA0355O15063 1070 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.74
COPB1-211ENST00000534234 NT5C2P49902 561 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 FAAP100Q0VG06 881 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 IMMTQ16891 758 aaKnown RBP10.46□□□□□ -0.74
COPB1-211ENST00000534234 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 C9orf50Q5SZB4 431 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 GPATCH4Q5T3I0 446 aaKnown RBP10.46□□□□□ -0.74
COPB1-211ENST00000534234 IQSEC1Q6DN90 963 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 PDGFCQ9NRA1 345 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 MTMR10Q9NXD2 777 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 ADD3Q9UEY8 706 aaKnown RBP10.46□□□□□ -0.74
COPB1-211ENST00000534234 PNMA2Q9UL42 364 aa10.46□□□□□ -0.74
COPB1-211ENST00000534234 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.74
COPB1-211ENST00000534234 PTPDC1A2A3K4 754 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 CTAGE5O15320 804 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 SMPD1P17405 629 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 PDE4AP27815 886 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 CDK7P50613 346 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 NKX3-2P78367 333 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 BEX3Q00994 111 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 TAPT1Q6NXT6 567 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 KIAA1211Q6ZU35 1233 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
COPB1-211ENST00000534234 UBA5Q9GZZ9 404 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 AP5M1Q9H0R1 490 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 KAT14Q9H8E8 782 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 GNEQ9Y223 722 aaKnown RBP10.45□□□□□ -0.74
COPB1-211ENST00000534234 LAMA3Q16787 3333 aa10.45□□□□□ -0.74
COPB1-211ENST00000534234 A0A0U1RQG5 324 aaPredicted RBP10.44□□□□□ -0.74
COPB1-211ENST00000534234 ARVCFO00192 962 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 CALML3P27482 149 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 ALDH5A1P51649 535 aaPredicted RBP10.44□□□□□ -0.74
COPB1-211ENST00000534234 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
COPB1-211ENST00000534234 FSCN1Q16658 493 aaKnown RBP10.44□□□□□ -0.74
COPB1-211ENST00000534234 TMEM63BQ5T3F8 832 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 RNF207Q6ZRF8 634 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 TLK2Q86UE8 772 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
COPB1-211ENST00000534234 MORC4Q8TE76 937 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 CLEC4DQ8WXI8 215 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 KRT23Q9C075 422 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 CPVLQ9H3G5 476 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 VTA1Q9NP79 307 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 Q9Y3F1 56 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 MROH7Q68CQ1 1323 aa10.44□□□□□ -0.74
COPB1-211ENST00000534234 LOC102724159A0A0B4J2E5 919 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 CABYRO75952 493 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 TIMP1P01033 207 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 GSPT1P15170 499 aaKnown RBP10.43□□□□□ -0.74
COPB1-211ENST00000534234 PTGS1P23219 599 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 EPHB4P54760 987 aa10.43□□□□□ -0.74
COPB1-211ENST00000534234 RPS6P62753 249 aaKnown RBP10.43□□□□□ -0.74
COPB1-211ENST00000534234 PWP2Q15269 919 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms