RNA–Protein interactions for RNA: ENST00000503732.1

SIL1-204, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-204ENST00000503732 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 NUCB1Q02818 461 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
SIL1-204ENST00000503732 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 SYDE2Q5VT97 1194 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 IQSEC1Q6DN90 963 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 STXBP5LQ9Y2K9 1186 aa17.04■□□□□ 0.32
SIL1-204ENST00000503732 ZNF536O15090 1300 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
SIL1-204ENST00000503732 ASGR1P07306 291 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 HAND2P61296 217 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 FPGSQ05932 587 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 IMMTQ16891 758 aaKnown RBP17.03■□□□□ 0.32
SIL1-204ENST00000503732 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
SIL1-204ENST00000503732 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
SIL1-204ENST00000503732 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
SIL1-204ENST00000503732 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
SIL1-204ENST00000503732 TRIM43BA6NCK2 446 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
SIL1-204ENST00000503732 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
SIL1-204ENST00000503732 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
SIL1-204ENST00000503732 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 TRIM43Q96BQ3 446 aaPredicted RBP17.02■□□□□ 0.32
SIL1-204ENST00000503732 VTA1Q9NP79 307 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 MTMR10Q9NXD2 777 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 Q9Y3F1 56 aa17.02■□□□□ 0.32
SIL1-204ENST00000503732 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
SIL1-204ENST00000503732 SHHQ15465 462 aa17.01■□□□□ 0.31
SIL1-204ENST00000503732 SH3RF1Q7Z6J0 888 aa17.01■□□□□ 0.31
SIL1-204ENST00000503732 TLK2Q86UE8 772 aa17.01■□□□□ 0.31
SIL1-204ENST00000503732 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
SIL1-204ENST00000503732 CNNM2Q9H8M5 875 aa17.01■□□□□ 0.31
SIL1-204ENST00000503732 MCM3APO60318 1980 aa17■□□□□ 0.31
SIL1-204ENST00000503732 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
SIL1-204ENST00000503732 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
SIL1-204ENST00000503732 ARVCFO00192 962 aa17■□□□□ 0.31
SIL1-204ENST00000503732 TIMP1P01033 207 aa17■□□□□ 0.31
SIL1-204ENST00000503732 PDHBP11177 359 aa17■□□□□ 0.31
SIL1-204ENST00000503732 SLC16A2P36021 539 aa17■□□□□ 0.31
SIL1-204ENST00000503732 SMAD3P84022 425 aaKnown RBP17■□□□□ 0.31
SIL1-204ENST00000503732 PPIGQ13427 754 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■□□□ 14
SIL1-204ENST00000503732 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
SIL1-204ENST00000503732 Q7L0L9 218 aa17■□□□□ 0.31
SIL1-204ENST00000503732 TMEM199Q8N511 208 aa17■□□□□ 0.31
SIL1-204ENST00000503732 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
SIL1-204ENST00000503732 KRT23Q9C075 422 aa17■□□□□ 0.31
SIL1-204ENST00000503732 MAF1Q9H063 256 aa17■□□□□ 0.31
SIL1-204ENST00000503732 KAT14Q9H8E8 782 aa17■□□□□ 0.31
SIL1-204ENST00000503732 RAD50Q92878 1312 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 LTBP2Q14767 1821 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 SNAP25P60880 206 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 NKX3-2P78367 333 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 BAATQ14032 418 aaPredicted RBP16.99■□□□□ 0.31
SIL1-204ENST00000503732 FSCN1Q16658 493 aaKnown RBP16.99■□□□□ 0.31
SIL1-204ENST00000503732 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 RNF207Q6ZRF8 634 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 RUFY2Q8WXA3 655 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 FGD4Q96M96 766 aa16.99■□□□□ 0.31
SIL1-204ENST00000503732 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
SIL1-204ENST00000503732 WDR19Q8NEZ3 1342 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 DYNC1LI2O43237 492 aaPredicted RBP16.98■□□□□ 0.31
SIL1-204ENST00000503732 IGHDP01880 384 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 TRDNQ13061 729 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 DNERQ8NFT8 737 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 UBAC1Q9BSL1 405 aa16.98■□□□□ 0.31
SIL1-204ENST00000503732 MTIF3Q9H2K0 278 aaKnown RBP16.98■□□□□ 0.31
SIL1-204ENST00000503732 KDM4AO75164 1064 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 CALML3P27482 149 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 CPT1AP50416 773 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 CDK7P50613 346 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 PDE4DQ08499 809 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 C9orf50Q5SZB4 431 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 MORC4Q8TE76 937 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 KATNBL1Q9H079 304 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 POLR3EQ9NVU0 708 aa16.97■□□□□ 0.31
SIL1-204ENST00000503732 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
SIL1-204ENST00000503732 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.31
SIL1-204ENST00000503732 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
SIL1-204ENST00000503732 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
SIL1-204ENST00000503732 MYADML2A6NDP7 307 aa16.96■□□□□ 0.31
SIL1-204ENST00000503732 NKRFO15226 690 aaKnown RBP eCLIP16.96■□□□□ 0.31
SIL1-204ENST00000503732 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
SIL1-204ENST00000503732 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
SIL1-204ENST00000503732 ALDH5A1P51649 535 aaPredicted RBP16.96■□□□□ 0.31
SIL1-204ENST00000503732 DUSP28Q4G0W2 176 aa16.96■□□□□ 0.31
SIL1-204ENST00000503732 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
SIL1-204ENST00000503732 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms