RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 NOP56O00567 594 aaKnown RBP3.97□□□□□ -1.77
SMAD1-203ENST00000502342 AURKAO14965 403 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 FGRP09769 529 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 PNLIPP16233 465 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 TACR1P25103 407 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 ARL4AP40617 200 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 RAP1GAPP47736 663 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 SEPHS1P49903 392 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 SRSF3P84103 164 aaKnown RBP3.97□□□□□ -1.77
SMAD1-203ENST00000502342 LAPTM5Q13571 262 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 FXNQ16595 210 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 NAALADL2Q58DX5 795 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 ATG14Q6ZNE5 492 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 SLCO6A1Q86UG4 719 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 ZNF513Q8N8E2 541 aaPredicted RBP3.97□□□□□ -1.77
SMAD1-203ENST00000502342 BVESQ8NE79 360 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 RCC1LQ96I51 464 aaKnown RBP3.97□□□□□ -1.77
SMAD1-203ENST00000502342 MCOLN1Q9GZU1 580 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 RXFP1Q9HBX9 757 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 CRTAC1Q9NQ79 661 aa3.97□□□□□ -1.77
SMAD1-203ENST00000502342 NUDT19A8MXV4 375 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 NPIPB6E9PJ23 425 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 NFIBO00712 420 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 PPP1R11O60927 126 aaPredicted RBP3.96□□□□□ -1.78
SMAD1-203ENST00000502342 GJB6O95452 261 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 KRT1P04264 644 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 RAB3GAP1Q15042 981 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 POMZP3Q6PJE2 187 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 ANKLE2Q86XL3 938 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 IRF2BP1Q8IU81 584 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 CRACR2BQ8N4Y2 399 aaPredicted RBP3.96□□□□□ -1.78
SMAD1-203ENST00000502342 CELF2-AS1Q8N7Q2 184 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 PPP1R16BQ96T49 567 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 SIRT5Q9NXA8 310 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 CLEC1BQ9P126 229 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 KLHL14Q9P2G3 628 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 ACSL6Q9UKU0 697 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 SMG5Q9UPR3 1016 aaKnown RBP3.96□□□□□ -1.78
SMAD1-203ENST00000502342 EMC9Q9Y3B6 208 aa3.96□□□□□ -1.78
SMAD1-203ENST00000502342 TBX1O43435 398 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 MPOP05164 745 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 ITGAVP06756 1048 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 VIPR1P32241 457 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 ECI1P42126 302 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 ZNF143P52747 638 aaPredicted RBP3.95□□□□□ -1.78
SMAD1-203ENST00000502342 NCKAP1LP55160 1127 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 ZC3H6P61129 1189 aaKnown RBP3.95□□□□□ -1.78
SMAD1-203ENST00000502342 DLG4P78352 724 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 SCRN1Q12765 414 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 SF1Q15637 639 aaKnown RBP3.95□□□□□ -1.78
SMAD1-203ENST00000502342 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 BICRALQ6AI39 1079 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 GTF2IRD2BQ6EKJ0 949 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 MRM1Q6IN84 353 aaKnown RBP3.95□□□□□ -1.78
SMAD1-203ENST00000502342 CYP2R1Q6VVX0 501 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 GTF2IRD2Q86UP8 949 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 BTN2A2Q8WVV5 523 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 SLC26A8Q96RN1 970 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 BTG4Q9NY30 223 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 GULP1Q9UBP9 304 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 RWDD3Q9Y3V2 267 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 BACE2Q9Y5Z0 518 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 HCFC2Q9Y5Z7 792 aa3.95□□□□□ -1.78
SMAD1-203ENST00000502342 NPHP3-ACAD11A0A0J9YXS1 232 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 ZC3H12DA2A288 527 aaKnown RBP3.94□□□□□ -1.78
SMAD1-203ENST00000502342 TCAF2A6NFQ2 919 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 DBX1A6NMT0 343 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 F8W031 263 aaPredicted RBP3.94□□□□□ -1.78
SMAD1-203ENST00000502342 SUSD5O60279 629 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 STK10O94804 968 aaKnown RBP3.94□□□□□ -1.78
SMAD1-203ENST00000502342 PLS3P13797 630 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 PAMP19021 973 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 CFPP27918 469 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 L1CAMP32004 1257 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 KCNJ6P48051 423 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 GRB10Q13322 594 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 FZD5Q13467 585 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 EEF1DP3Q658K8 133 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 TRIM59Q8IWR1 403 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 PANK1Q8TE04 598 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 USP33Q8TEY7 942 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 MRGPRX3Q96LB0 322 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 GMLQ99445 158 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 BCAS3Q9H6U6 928 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 GCM1Q9NP62 436 aa3.94□□□□□ -1.78
SMAD1-203ENST00000502342 TEX51A0A1B0GUA7 166 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 C7orf72A4D263 438 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 ARNTLO00327 626 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 KLF4O43474 513 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 PEX10O60683 326 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 FUCA1P04066 466 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 THBDP07204 575 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 SNRPB2P08579 225 aaKnown RBP3.93□□□□□ -1.78
SMAD1-203ENST00000502342 GTF2F1P35269 517 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMAD1-203ENST00000502342 EPHB3P54753 998 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 ERVFRD-1P60508 538 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 INF2Q27J81 1249 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 PRSS53Q2L4Q9 553 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms