RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 KIR2DL1P43626 348 aaPredicted RBP5.96□□□□□ -1.46
SMC4-225ENST00000497203 KIR2DL2P43627 348 aaPredicted RBP5.96□□□□□ -1.46
SMC4-225ENST00000497203 MLANAQ16655 118 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 MRM1Q6IN84 353 aaKnown RBP5.96□□□□□ -1.46
SMC4-225ENST00000497203 PRR23BQ6ZRT6 265 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 ARHGEF39Q8N4T4 335 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 FCRL3Q96P31 734 aaPredicted RBP5.96□□□□□ -1.46
SMC4-225ENST00000497203 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 GPR160Q9UJ42 338 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 SUGT1Q9Y2Z0 365 aa5.96□□□□□ -1.46
SMC4-225ENST00000497203 LRRC10BA6NIK2 292 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 CCDC85CA6NKD9 419 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 ENDOUP21128 410 aaKnown RBP5.95□□□□□ -1.46
SMC4-225ENST00000497203 POU4F1Q01851 419 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 KIR3DS1Q14943 382 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 SLC14A2Q15849 920 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 ZNF124Q15973 351 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 MPZL3Q6UWV2 235 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 NLRX1Q86UT6 975 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 ZNF669Q96BR6 464 aaPredicted RBP5.95□□□□□ -1.46
SMC4-225ENST00000497203 RCC1LQ96I51 464 aaKnown RBP5.95□□□□□ -1.46
SMC4-225ENST00000497203 APBA2Q99767 749 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 PLCD4Q9BRC7 762 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 LGR4Q9BXB1 951 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 TBX22Q9Y458 520 aa5.95□□□□□ -1.46
SMC4-225ENST00000497203 STXBP3O00186 592 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 FGF10O15520 208 aaPredicted RBP5.94□□□□□ -1.46
SMC4-225ENST00000497203 NRDCO43847 1150 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 GJB6O95452 261 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 NAT2P11245 290 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 NOP2P46087 812 aaKnown RBP5.94□□□□□ -1.46
SMC4-225ENST00000497203 RTP1P59025 263 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 DPY19L1Q2PZI1 675 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 HSF5Q4G112 596 aaPredicted RBP5.94□□□□□ -1.46
SMC4-225ENST00000497203 SDE2Q6IQ49 451 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 EEPD1Q7L9B9 569 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 SLCO6A1Q86UG4 719 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 SIRT2Q8IXJ6 389 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 NAT16Q8N8M0 369 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 ST13P5Q8NFI4 369 aaPredicted RBP5.94□□□□□ -1.46
SMC4-225ENST00000497203 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
SMC4-225ENST00000497203 YBX2Q9Y2T7 364 aaKnown RBP5.94□□□□□ -1.46
SMC4-225ENST00000497203 FAM221BA6H8Z2 402 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 AURKAO14965 403 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 SUSD5O60279 629 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 CLSTN1O94985 981 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 ZNF143P52747 638 aaPredicted RBP5.93□□□□□ -1.46
SMC4-225ENST00000497203 AMPD2Q01433 879 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 GRB10Q13322 594 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 SNX17Q15036 470 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 MTERF2Q49AM1 385 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 PPP1R14AQ96A00 147 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 JMJD8Q96S16 334 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 EPN3Q9H201 632 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 NSUN3Q9H649 340 aaKnown RBP5.93□□□□□ -1.46
SMC4-225ENST00000497203 CWC22Q9HCG8 908 aaKnown RBP5.93□□□□□ -1.46
SMC4-225ENST00000497203 AKT3Q9Y243 479 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 EMC9Q9Y3B6 208 aa5.93□□□□□ -1.46
SMC4-225ENST00000497203 KCNH1O95259 989 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 MESP2Q0VG99 397 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 RCSD1Q6JBY9 416 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 JAZF1Q86VZ6 243 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 BVESQ8NE79 360 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 INTS4Q96HW7 963 aaKnown RBP5.92□□□□□ -1.46
SMC4-225ENST00000497203 PTCHD1Q96NR3 888 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 TAF6LQ9Y6J9 622 aa5.92□□□□□ -1.46
SMC4-225ENST00000497203 A0A1W2PQ45 241 aaPredicted RBP5.91□□□□□ -1.46
SMC4-225ENST00000497203 A0A1W2PQY0 241 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
SMC4-225ENST00000497203 TBX1O43435 398 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 FARP2O94887 1054 aaPredicted RBP5.91□□□□□ -1.46
SMC4-225ENST00000497203 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 SV2CQ496J9 727 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 HLA-DQA1Q5Y7H0 255 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 GALNT18Q6P9A2 607 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 MRGPRX3Q96LB0 322 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 DNAJC7Q99615 494 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 SLC6A17Q9H1V8 727 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 IMPACTQ9P2X3 320 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 BACE2Q9Y5Z0 518 aa5.91□□□□□ -1.46
SMC4-225ENST00000497203 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
SMC4-225ENST00000497203 C2orf71A6NGG8 1288 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 AGRPO00253 132 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 NOP56O00567 594 aaKnown RBP5.9□□□□□ -1.46
SMC4-225ENST00000497203 ITGAVP06756 1048 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 PRKCAP17252 672 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 SDHBP21912 280 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 EEF1DP3Q658K8 133 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 ZNF227Q86WZ6 799 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 IRF2BP1Q8IU81 584 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 TRIM59Q8IWR1 403 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 NUP43Q8NFH3 380 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 DCP1AQ9NPI6 582 aaPredicted RBP5.9□□□□□ -1.46
SMC4-225ENST00000497203 CRTAC1Q9NQ79 661 aa5.9□□□□□ -1.46
SMC4-225ENST00000497203 ACSL6Q9UKU0 697 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms