RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
FIRRE-201ENST00000427391 MYH1P12882 1939 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
FIRRE-201ENST00000427391 PDHBP11177 359 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 KRT9P35527 623 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 SLC16A2P36021 539 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 KLK7P49862 253 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 STK4Q13043 487 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
FIRRE-201ENST00000427391 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
FIRRE-201ENST00000427391 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 KBTBD4Q9NVX7 518 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 TRIM10Q9UDY6 481 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
FIRRE-201ENST00000427391 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 LRRC10BA6NIK2 292 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 SLC37A4O43826 429 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 RAD21O60216 631 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 TDP2O95551 362 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 CACNB3P54284 484 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 UBE2SQ16763 222 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 ZNF569Q5MCW4 686 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 GAKO14976 1311 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 EDIL3O43854 480 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 ASIC1P78348 528 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 BBOX1O75936 387 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 PDE4DQ08499 809 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 TMED8Q6PL24 325 aaPredicted RBP13.06□□□□□ -0.32
FIRRE-201ENST00000427391 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
FIRRE-201ENST00000427391 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
FIRRE-201ENST00000427391 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
FIRRE-201ENST00000427391 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
FIRRE-201ENST00000427391 POTEMA6NI47 508 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 B4DLN1 442 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
FIRRE-201ENST00000427391 TUBB4AP04350 444 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 NFIAQ12857 509 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 PROM2Q8N271 834 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
FIRRE-201ENST00000427391 NUDT12Q9BQG2 462 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
FIRRE-201ENST00000427391 TRIM9Q9C026 710 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 UBR3Q6ZT12 1888 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 PLCG2P16885 1265 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 ADRA2BP18089 450 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
FIRRE-201ENST00000427391 GOLGA6L9A6NEM1 432 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
FIRRE-201ENST00000427391 PPP1R11O60927 126 aaPredicted RBP13.04□□□□□ -0.32
FIRRE-201ENST00000427391 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
FIRRE-201ENST00000427391 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
FIRRE-201ENST00000427391 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 H7C1D1 291 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 GNA11P29992 359 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 TNNI2P48788 182 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 MCM6Q14566 821 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 MB21D1Q8N884 522 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
FIRRE-201ENST00000427391 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 ITIH6Q6UXX5 1313 aa13.04□□□□□ -0.32
FIRRE-201ENST00000427391 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 PSMA7O14818 248 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 TPM1P09493 284 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
FIRRE-201ENST00000427391 GABPAQ06546 454 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 SPAG1Q07617 926 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 IPO4Q8TEX9 1081 aaKnown RBP13.03□□□□□ -0.32
FIRRE-201ENST00000427391 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 AGPAT5Q9NUQ2 364 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 REXO2Q9Y3B8 237 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms