RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
PTCD1-202ENST00000419981 NMIQ13287 307 aaPredicted RBP20.4■□□□□ 0.86
PTCD1-202ENST00000419981 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
PTCD1-202ENST00000419981 CCDC171Q6TFL3 1326 aa20.4■□□□□ 0.86
PTCD1-202ENST00000419981 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
PTCD1-202ENST00000419981 CYP39A1Q9NYL5 469 aa20.4■□□□□ 0.86
PTCD1-202ENST00000419981 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.39■□□□□ 0.85
PTCD1-202ENST00000419981 ICAM1P05362 532 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
PTCD1-202ENST00000419981 EPHB4P54760 987 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 AAMPQ13685 434 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 NOL8Q76FK4 1167 aaKnown RBP20.39■□□□□ 0.85
PTCD1-202ENST00000419981 RILPL2Q969X0 211 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 TMEM47Q9BQJ4 181 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 RANBP17Q9H2T7 1088 aaKnown RBP20.39■□□□□ 0.85
PTCD1-202ENST00000419981 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
PTCD1-202ENST00000419981 ASTN1O14525 1302 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 CDK7P50613 346 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 NKX3-2P78367 333 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 TTBK2Q6IQ55 1244 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 BTNL9Q6UXG8 535 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 NSMFQ6X4W1 530 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 TLK2Q86UE8 772 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 TBX21Q9UL17 535 aa20.38■□□□□ 0.85
PTCD1-202ENST00000419981 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 FRMPD2Q68DX3 1309 aaPredicted RBP20.37■□□□□ 0.85
PTCD1-202ENST00000419981 ARVCFO00192 962 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 CTAGE5O15320 804 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 TIMP1P01033 207 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 SLC16A2P36021 539 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 MFAP1P55081 439 aaKnown RBP20.37■□□□□ 0.85
PTCD1-202ENST00000419981 HAND2P61296 217 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 BEX3Q00994 111 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 SYDE2Q5VT97 1194 aa20.37■□□□□ 0.85
PTCD1-202ENST00000419981 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
PTCD1-202ENST00000419981 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
PTCD1-202ENST00000419981 TLR3O15455 904 aaKnown RBP20.36■□□□□ 0.85
PTCD1-202ENST00000419981 PCP11498 1178 aaKnown RBP20.36■□□□□ 0.85
PTCD1-202ENST00000419981 AKNAD1Q5T1N1 836 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 MFSD6Q6ZSS7 791 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 FBXO16Q8IX29 292 aaPredicted RBP20.36■□□□□ 0.85
PTCD1-202ENST00000419981 SMC5Q8IY18 1101 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 AP5M1Q9H0R1 490 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 SEMA6BQ9H3T3 888 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 GPCPD1Q9NPB8 672 aa20.36■□□□□ 0.85
PTCD1-202ENST00000419981 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
PTCD1-202ENST00000419981 MYO9BQ13459 2157 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 PDHBP11177 359 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 MFSD5Q6N075 450 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 EEPD1Q7L9B9 569 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 FAM126BQ8IXS8 530 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 CDX2Q99626 313 aaPredicted RBP20.35■□□□□ 0.85
PTCD1-202ENST00000419981 VTA1Q9NP79 307 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 SCN5AQ14524 2016 aa20.35■□□□□ 0.85
PTCD1-202ENST00000419981 SCN10AQ9Y5Y9 1956 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 CABYRO75952 493 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 SMPD1P17405 629 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 SDSP20132 328 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 PPIGQ13427 754 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTCD1-202ENST00000419981 FSCN1Q16658 493 aaKnown RBP20.34■□□□□ 0.85
PTCD1-202ENST00000419981 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 TAPT1Q6NXT6 567 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 TTC14Q96N46 770 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 TTYH1Q9H313 450 aaPredicted RBP20.34■□□□□ 0.85
PTCD1-202ENST00000419981 RNF41Q9H4P4 317 aaPredicted RBP20.34■□□□□ 0.85
PTCD1-202ENST00000419981 PDGFCQ9NRA1 345 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
PTCD1-202ENST00000419981 TANC1Q9C0D5 1861 aa20.34■□□□□ 0.85
PTCD1-202ENST00000419981 TMEM265A0A087WTH1 108 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 PTPDC1A2A3K4 754 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 NFIBO00712 420 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 ZEB2O60315 1214 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 ALDH5A1P51649 535 aaPredicted RBP20.33■□□□□ 0.85
PTCD1-202ENST00000419981 BAATQ14032 418 aaPredicted RBP20.33■□□□□ 0.85
PTCD1-202ENST00000419981 CXCL17Q6UXB2 119 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 PLEKHM2Q8IWE5 1019 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 MORC4Q8TE76 937 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
PTCD1-202ENST00000419981 PURBQ96QR8 312 aaKnown RBP20.33■□□□□ 0.85
PTCD1-202ENST00000419981 PPP1R12CQ9BZL4 782 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 PNMA2Q9UL42 364 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 Q9Y3F1 56 aa20.33■□□□□ 0.85
PTCD1-202ENST00000419981 TRIP12Q14669 1992 aaPredicted RBP20.33■□□□□ 0.84
PTCD1-202ENST00000419981 NEDD4P46934 1319 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 DYNC1LI2O43237 492 aaPredicted RBP20.32■□□□□ 0.84
PTCD1-202ENST00000419981 CD4P01730 458 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
PTCD1-202ENST00000419981 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 TMEM199Q8N511 208 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 ESR2Q92731 530 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTCD1-202ENST00000419981 OSBPL3Q9H4L5 887 aa20.32■□□□□ 0.84
PTCD1-202ENST00000419981 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.31■□□□□ 0.84
PTCD1-202ENST00000419981 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.31■□□□□ 0.84
PTCD1-202ENST00000419981 CSF2RAP15509 400 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms