RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
NCBP3-205ENST00000575815 KDM3BQ7LBC6 1761 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 PDHBP11177 359 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-205ENST00000575815 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 SV2BQ7L1I2 683 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 ZNF384Q8TF68 577 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 FBXO28Q9NVF7 368 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 DOT1LQ8TEK3 1739 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 ZBTB5O15062 677 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 CBFA2T2O43439 604 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 COBLO75128 1261 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 HDLBPQ00341 1268 aaKnown RBP9.43□□□□□ -0.9
NCBP3-205ENST00000575815 POSTNQ15063 836 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 CCDC40Q4G0X9 1142 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 IL17RBQ9NRM6 502 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 ESPNB1AK53 854 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 GAS7O60861 476 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 INPP5BP32019 993 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 PDE4DQ08499 809 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 MTMR2Q13614 643 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 ARHGEF16Q5VV41 709 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-205ENST00000575815 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
NCBP3-205ENST00000575815 PSMA7O14818 248 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 EIF2AK2P19525 551 aaKnown RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 SFPQP23246 707 aaKnown RBP eCLIP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 SEC23AQ15436 765 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 PLA2G4DQ86XP0 818 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 TSG101Q99816 390 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 YDJCA8MPS7 323 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 FOXP2O15409 715 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 KIAA1468Q9P260 1216 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 XIRP1Q702N8 1843 aaKnown RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 CASP1P29466 404 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 APOBEC3FQ8IUX4 373 aaKnown RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 TRMT1Q9NXH9 659 aaKnown RBP9.42□□□□□ -0.9
NCBP3-205ENST00000575815 IFNKQ9P0W0 207 aa9.42□□□□□ -0.9
NCBP3-205ENST00000575815 C15orf52Q6ZUT6 534 aaKnown RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 PSMD1Q99460 953 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 ZNF445P59923 1031 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 ELP3Q9H9T3 547 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 POLD4Q9HCU8 107 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 ZNHIT6Q9NWK9 470 aaKnown RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 BARHL2Q9NY43 387 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 GINS2Q9Y248 185 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 FAM13AO94988 1023 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 USP14P54578 494 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 SHROOM1Q2M3G4 852 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 C5P01031 1676 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 PDS5AQ29RF7 1337 aaKnown RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 CAVIN2O95810 425 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 TAL1P17542 331 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 SHMT1P34896 483 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 KRBA2Q6ZNG9 492 aa9.41□□□□□ -0.9
NCBP3-205ENST00000575815 SMYD4Q8IYR2 804 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 MPHOSPH6Q99547 160 aaKnown RBP9.41□□□□□ -0.9
NCBP3-205ENST00000575815 LRRC37A3O60309 1634 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 MEIS1O00470 390 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 VEGFAP15692 232 aaPredicted RBP9.4□□□□□ -0.9
NCBP3-205ENST00000575815 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 DCAF4Q8WV16 495 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 DNM3Q9UQ16 869 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 CACNB1Q02641 598 aaPredicted RBP9.4□□□□□ -0.9
NCBP3-205ENST00000575815 HAUS3Q68CZ6 603 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 NLRX1Q86UT6 975 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 BICD1Q96G01 975 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 SEPT11Q9NVA2 429 aaKnown RBP9.4□□□□□ -0.9
NCBP3-205ENST00000575815 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 CTNND2Q9UQB3 1225 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 NFE2L3Q9Y4A8 694 aa9.4□□□□□ -0.9
NCBP3-205ENST00000575815 TDP2O95551 362 aa9.4□□□□□ -0.91
NCBP3-205ENST00000575815 VIL1P09327 827 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms