RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CCDC148Q8NFR7 591 aa33.16■■■□□ 2.9
BRF1-213ENST00000548421 CCDC12Q8WUD4 166 aaPredicted RBP33.16■■■□□ 2.9
BRF1-213ENST00000548421 SHISA4Q96DD7 197 aa33.16■■■□□ 2.9
BRF1-213ENST00000548421 PPP1R11O60927 126 aaPredicted RBP33.15■■■□□ 2.9
BRF1-213ENST00000548421 FDX1P10109 184 aa33.15■■■□□ 2.9
BRF1-213ENST00000548421 PABPC4Q13310 644 aaKnown RBP eCLIP33.15■■■□□ 2.9
BRF1-213ENST00000548421 HHIPL1Q96JK4 782 aa33.15■■■□□ 2.9
BRF1-213ENST00000548421 COL11A1P12107 1806 aaPredicted RBP33.15■■■□□ 2.9
BRF1-213ENST00000548421 MMP1P03956 469 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 DSG3P32926 999 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 FBXO11Q86XK2 927 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 PHF20Q9BVI0 1012 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 AMNQ9BXJ7 453 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 HOXC10Q9NYD6 342 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 KCNJ14Q9UNX9 436 aa33.14■■■□□ 2.9
BRF1-213ENST00000548421 CCL15-CCL14A0A0B4J2E2 113 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 NAPAP54920 295 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 CCL15Q16663 113 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 GPAT2Q6NUI2 795 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 TYW1BQ6NUM6 668 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 PPP1R18Q6NYC8 613 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 SLC38A10Q9HBR0 1119 aa33.13■■■□□ 2.89
BRF1-213ENST00000548421 SLC10A3P09131 477 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 TRAF1Q13077 416 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 FOXD4L5Q5VV16 416 aaPredicted RBP33.12■■■□□ 2.89
BRF1-213ENST00000548421 FOXD4L4Q8WXT5 416 aaPredicted RBP33.12■■■□□ 2.89
BRF1-213ENST00000548421 COA7Q96BR5 231 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 ATG4CQ96DT6 458 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 VWA5AO00534 786 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 ZBED4O75132 1171 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 F13A1P00488 732 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 NLRP5P59047 1200 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 IRX3P78415 501 aaPredicted RBP33.12■■■□□ 2.89
BRF1-213ENST00000548421 SAFBQ15424 915 aaKnown RBP eCLIP33.12■■■□□ 2.89
BRF1-213ENST00000548421 CCDC174Q6PII3 467 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 ADAMTS5Q9UNA0 930 aa33.12■■■□□ 2.89
BRF1-213ENST00000548421 CTDP1Q9Y5B0 961 aaPredicted RBP33.12■■■□□ 2.89
BRF1-213ENST00000548421 A0A0G2JMZ2 1700 aa33.11■■■□□ 2.89
BRF1-213ENST00000548421 CALML3P27482 149 aa33.11■■■□□ 2.89
BRF1-213ENST00000548421 MCTP1Q6DN14 999 aa33.11■■■□□ 2.89
BRF1-213ENST00000548421 CCDC102AQ96A19 550 aa33.11■■■□□ 2.89
BRF1-213ENST00000548421 PCDHA1Q9Y5I3 950 aa33.11■■■□□ 2.89
BRF1-213ENST00000548421 SPDYE16A6NNV3 312 aaPredicted RBP33.1■■■□□ 2.89
BRF1-213ENST00000548421 BRI3BPQ8WY22 251 aa33.1■■■□□ 2.89
BRF1-213ENST00000548421 ESYT2A0FGR8 921 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 ICAM1P05362 532 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 OSBPP22059 807 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 GALNT17Q6IS24 598 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 FERMT3Q86UX7 667 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 ZMYND12Q9H0C1 365 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 ASCC2Q9H1I8 757 aaPredicted RBP33.09■■■□□ 2.89
BRF1-213ENST00000548421 BRMS1Q9HCU9 246 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 SLC45A1Q9Y2W3 748 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 SMCHD1A6NHR9 2005 aa33.09■■■□□ 2.89
BRF1-213ENST00000548421 APLP1P51693 650 aa33.08■■■□□ 2.89
BRF1-213ENST00000548421 KIF23Q02241 960 aaPredicted RBP33.08■■■□□ 2.89
BRF1-213ENST00000548421 USH1GQ495M9 461 aa33.08■■■□□ 2.89
BRF1-213ENST00000548421 DIS3L2Q8IYB7 885 aaKnown RBP33.08■■■□□ 2.89
BRF1-213ENST00000548421 PNMA2Q9UL42 364 aa33.08■■■□□ 2.89
BRF1-213ENST00000548421 ZNF536O15090 1300 aa33.08■■■□□ 2.89
BRF1-213ENST00000548421 KRT2P35908 639 aa33.07■■■□□ 2.88
BRF1-213ENST00000548421 ANKRD23Q86SG2 305 aa33.07■■■□□ 2.88
BRF1-213ENST00000548421 ZSCAN16Q9H4T2 348 aaPredicted RBP33.07■■■□□ 2.88
BRF1-213ENST00000548421 C6orf50Q9HD87 102 aa33.07■■■□□ 2.88
BRF1-213ENST00000548421 CREBZFQ9NS37 354 aa33.07■■■□□ 2.88
BRF1-213ENST00000548421 PNMA3Q9UL41 463 aa33.07■■■□□ 2.88
BRF1-213ENST00000548421 TESPA1A2RU30 521 aaPredicted RBP33.06■■■□□ 2.88
BRF1-213ENST00000548421 SMCO2A6NFE2 343 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 MANSC4A6NHS7 340 aaPredicted RBP33.06■■■□□ 2.88
BRF1-213ENST00000548421 GNA11P29992 359 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 RESTQ13127 1097 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 GNL2Q13823 731 aaKnown RBP33.06■■■□□ 2.88
BRF1-213ENST00000548421 NPY5RQ15761 445 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 REPS2Q8NFH8 660 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 P2RX7Q99572 595 aaKnown RBP33.06■■■□□ 2.88
BRF1-213ENST00000548421 PCDHA4Q9UN74 947 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 MYH15Q9Y2K3 1946 aa33.06■■■□□ 2.88
BRF1-213ENST00000548421 FAM155AB1AL88 458 aaPredicted RBP33.05■■■□□ 2.88
BRF1-213ENST00000548421 BTBD19C9JJ37 291 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 OAZ1P54368 228 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 LBX2Q6XYB7 198 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 DAGLBQ8NCG7 672 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 FOXP1Q9H334 677 aaPredicted RBP33.05■■■□□ 2.88
BRF1-213ENST00000548421 CCPG1Q9ULG6 757 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 ABCB11O95342 1321 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 HERVK_113P62684 666 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 CPXCR1Q8N123 301 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 MB21D1Q8N884 522 aa33.05■■■□□ 2.88
BRF1-213ENST00000548421 TNPO1Q92973 898 aaKnown RBP33.05■■■□□ 2.88
BRF1-213ENST00000548421 RAVER2Q9HCJ3 691 aaKnown RBP33.05■■■□□ 2.88
BRF1-213ENST00000548421 BTBD18B2RXH4 712 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 KIF28PB7ZC32 967 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 U2AF2P26368 475 aaKnown RBP eCLIP33.04■■■□□ 2.88
BRF1-213ENST00000548421 BLIDQ8IZY5 108 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 BICD2Q8TD16 824 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 AGBL1Q96MI9 1066 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 ATP6V1DQ9Y5K8 247 aa33.04■■■□□ 2.88
BRF1-213ENST00000548421 PDHXO00330 501 aa33.03■■■□□ 2.88
BRF1-213ENST00000548421 ATP2A1O14983 1001 aa33.03■■■□□ 2.88
BRF1-213ENST00000548421 ADCY7P51828 1080 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms