RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KCNG4Q8TDN1 519 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 NOL7Q9UMY1 257 aaKnown RBP34.88■■■■□ 3.17
CCM2-219ENST00000544363 PCDHA6Q9UN73 950 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 PCDHA8Q9Y5H6 950 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 CSADQ9Y600 493 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 NOM1Q5C9Z4 860 aaKnown RBP34.88■■■■□ 3.17
CCM2-219ENST00000544363 BICD2Q8TD16 824 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 PGBD1Q96JS3 809 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 SNAP25P60880 206 aa34.87■■■■□ 3.17
CCM2-219ENST00000544363 SLC39A14Q15043 492 aa34.87■■■■□ 3.17
CCM2-219ENST00000544363 PIK3AP1Q6ZUJ8 805 aa34.87■■■■□ 3.17
CCM2-219ENST00000544363 AMNQ9BXJ7 453 aa34.87■■■■□ 3.17
CCM2-219ENST00000544363 GOLGA6L4A6NEF3 574 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 C19orf81C9J6K1 198 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 SPTLC2O15270 562 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 ADCY7P51828 1080 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 RASGRP4Q8TDF6 673 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 KIFC2Q96AC6 838 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 AFG3L2Q9Y4W6 797 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 PCDHA1Q9Y5I3 950 aa34.86■■■■□ 3.17
CCM2-219ENST00000544363 TRIM75PA6NK02 468 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 DGKZQ13574 1117 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 PTPAQ15257 358 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 MAP3K11Q16584 847 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 FBXO11Q86XK2 927 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 OTOFQ9HC10 1997 aa34.85■■■■□ 3.17
CCM2-219ENST00000544363 VCAM1P19320 739 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 TRAPPC10P48553 1259 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 TPRNQ4KMQ1 711 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 C12orf42Q96LP6 360 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 RANBP17Q9H2T7 1088 aaKnown RBP34.84■■■■□ 3.17
CCM2-219ENST00000544363 RIC8AQ9NPQ8 531 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 FBXO28Q9NVF7 368 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 CCDC194A0A1B0GVG4 234 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 ME1P48163 572 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 MAP1SQ66K74 1059 aaPredicted RBP34.84■■■■□ 3.17
CCM2-219ENST00000544363 PCDHB6Q9Y5E3 794 aa34.84■■■■□ 3.17
CCM2-219ENST00000544363 ATP2B1P20020 1258 aa34.83■■■■□ 3.17
CCM2-219ENST00000544363 TTLL12Q14166 644 aaPredicted RBP34.83■■■■□ 3.17
CCM2-219ENST00000544363 ANKRD13AQ8IZ07 590 aa34.83■■■■□ 3.17
CCM2-219ENST00000544363 KRT25Q7Z3Z0 450 aa34.82■■■■□ 3.16
CCM2-219ENST00000544363 REXO1Q8N1G1 1221 aaKnown RBP34.82■■■■□ 3.16
CCM2-219ENST00000544363 PCDHA7Q9UN72 937 aa34.82■■■■□ 3.16
CCM2-219ENST00000544363 PPP6R2O75170 966 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 TRAF1Q13077 416 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 ARMC9Q7Z3E5 817 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 PRPF38AQ8NAV1 312 aaKnown RBP34.81■■■■□ 3.16
CCM2-219ENST00000544363 CUL5Q93034 780 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 SLF1Q9BQI6 1058 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 GLT8D2Q9H1C3 349 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 RPAP3Q9H6T3 665 aaPredicted RBP34.81■■■■□ 3.16
CCM2-219ENST00000544363 CEP131Q9UPN4 1083 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 MRPL12P52815 198 aaKnown RBP34.81■■■■□ 3.16
CCM2-219ENST00000544363 HMGCS2P54868 508 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 CAVIN1Q6NZI2 390 aaKnown RBP34.81■■■■□ 3.16
CCM2-219ENST00000544363 MOB2Q70IA6 237 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 TANGO6Q9C0B7 1094 aa34.81■■■■□ 3.16
CCM2-219ENST00000544363 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.81■■■■□ 3.16
CCM2-219ENST00000544363 TTC38Q5R3I4 469 aa34.8■■■■□ 3.16
CCM2-219ENST00000544363 JMYQ8N9B5 988 aa34.8■■■■□ 3.16
CCM2-219ENST00000544363 RBM46Q8TBY0 533 aaKnown RBP34.8■■■■□ 3.16
CCM2-219ENST00000544363 PSTPIP2Q9H939 334 aa34.8■■■■□ 3.16
CCM2-219ENST00000544363 BIN2Q9UBW5 565 aaPredicted RBP34.8■■■■□ 3.16
CCM2-219ENST00000544363 LDHDQ86WU2 507 aa34.79■■■■□ 3.16
CCM2-219ENST00000544363 GZF1Q9H116 711 aaPredicted RBP34.79■■■■□ 3.16
CCM2-219ENST00000544363 USH1GQ495M9 461 aa34.78■■■■□ 3.16
CCM2-219ENST00000544363 SH3D19Q5HYK7 790 aa34.78■■■■□ 3.16
CCM2-219ENST00000544363 ADALQ6DHV7 355 aa34.78■■■■□ 3.16
CCM2-219ENST00000544363 SAMD1Q6SPF0 538 aaPredicted RBP34.78■■■■□ 3.16
CCM2-219ENST00000544363 ELP3Q9H9T3 547 aa34.78■■■■□ 3.16
CCM2-219ENST00000544363 TMOD4Q9NZQ9 345 aa34.78■■■■□ 3.16
CCM2-219ENST00000544363 MARCKSP29966 332 aaPredicted RBP34.77■■■■□ 3.16
CCM2-219ENST00000544363 JAKMIP3Q5VZ66 844 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.77■■■■□ 3.16
CCM2-219ENST00000544363 TRAF5O00463 557 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 WNT7AO00755 349 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 FLOT1O75955 427 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 BMP15O95972 392 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 CLK2P49760 499 aaKnown RBP34.77■■■■□ 3.16
CCM2-219ENST00000544363 PPATQ06203 517 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 NONOQ15233 471 aaKnown RBP eCLIP34.77■■■■□ 3.16
CCM2-219ENST00000544363 CCDC174Q6PII3 467 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 ERO1BQ86YB8 467 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 CLMNQ96JQ2 1002 aa34.77■■■■□ 3.16
CCM2-219ENST00000544363 MORC2Q9Y6X9 1032 aaPredicted RBP34.77■■■■□ 3.16
CCM2-219ENST00000544363 INF2Q27J81 1249 aa34.76■■■■□ 3.15
CCM2-219ENST00000544363 NMRK2Q9NPI5 230 aa34.76■■■■□ 3.15
CCM2-219ENST00000544363 TMEM260Q9NX78 707 aa34.76■■■■□ 3.15
CCM2-219ENST00000544363 PPP1R9AQ9ULJ8 1098 aa34.76■■■■□ 3.15
CCM2-219ENST00000544363 ZNF174Q15697 407 aa34.75■■■■□ 3.15
CCM2-219ENST00000544363 CNKSR2Q8WXI2 1034 aa34.75■■■■□ 3.15
CCM2-219ENST00000544363 TMEM63CQ9P1W3 806 aa34.75■■■■□ 3.15
CCM2-219ENST00000544363 A0A1W2PQ27 194 aa34.74■■■■□ 3.15
CCM2-219ENST00000544363 A0A1W2PQ64 194 aa34.74■■■■□ 3.15
CCM2-219ENST00000544363 A0A1W2PQD8 194 aa34.74■■■■□ 3.15
CCM2-219ENST00000544363 AXDND1Q5T1B0 1012 aaPredicted RBP34.74■■■■□ 3.15
CCM2-219ENST00000544363 SPDYE5A6NIY4 337 aa34.73■■■■□ 3.15
CCM2-219ENST00000544363 LIG1P18858 919 aa34.73■■■■□ 3.15
CCM2-219ENST00000544363 UBE2SQ16763 222 aa34.73■■■■□ 3.15
CCM2-219ENST00000544363 LDLRAD1Q5T700 205 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms