RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TRANK1O15050 2925 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 SRGAP3O43295 1099 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 CYP2C19P33261 490 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 ANP32AP39687 249 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 RGS3P49796 1198 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 TMEM240Q5SV17 173 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 SLC44A5Q8NCS7 719 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 EMID1Q96A84 441 aaPredicted RBP7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 CRBNQ96SW2 442 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 PUS3Q9BZE2 481 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 KCNH6Q9H252 994 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 NKX2-4Q9H2Z4 354 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 CWC22Q9HCG8 908 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 ZBTB40Q9NUA8 1239 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 COG5Q9UP83 839 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 GBF1Q92538 1859 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 CHD7Q9P2D1 2997 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 DDTLA6NHG4 134 aaPredicted RBP7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 WIPF1O43516 503 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 ENTPD3O75355 529 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 GLRX3O76003 335 aaKnown RBP7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 HOXA7P31268 230 aaPredicted RBP7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 SLC19A1P41440 591 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 GCGRP47871 477 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 HERVK_113P62684 666 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 ERVK-24P63145 666 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 LRRC41Q15345 812 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 RAB30Q15771 203 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 RASIP1Q5U651 963 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 KLHDC4Q8TBB5 520 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 LRRN4Q8WUT4 740 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 TATDN2Q93075 761 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 PAGR1Q9BTK6 254 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 CACNA1GO43497 2377 aa7.23□□□□□ -1.25
SMARCC1-204ENST00000462198 DOCK2Q92608 1830 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 PNMA6EA0A0J9YXQ4 647 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 SLC15A5A6NIM6 579 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 PQBP1O60828 265 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 HMMRO75330 724 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 TIMP1P01033 207 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 ATP8B2P98198 1209 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 MTX1Q13505 466 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 MTMR2Q13614 643 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 CEP85Q6P2H3 762 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 CCDC174Q6PII3 467 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 ZNF365Q70YC5 407 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 RPAP2Q8IXW5 612 aaPredicted RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 NPLOC4Q8TAT6 608 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 EPS8L1Q8TE68 723 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 IDI2Q9BXS1 227 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 SIL1Q9H173 461 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 IGSF5Q9NSI5 407 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 MTCH2Q9Y6C9 303 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 ZFHX2Q9C0A1 2572 aaPredicted RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 LOC285556D6RIA3 1793 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 MROH5Q6ZUA9 1318 aa7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 PTPRZ1P23471 2315 aaPredicted RBP7.22□□□□□ -1.25
SMARCC1-204ENST00000462198 CFAP54Q96N23 3096 aa7.21□□□□□ -1.25
SMARCC1-204ENST00000462198 LRRC37A2A6NM11 1700 aa7.21□□□□□ -1.25
SMARCC1-204ENST00000462198 RBM47A0AV96 593 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 DCDC2CA8MYV0 355 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 CFAP99D6REC4 459 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 EYA2O00167 538 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 RFXAPO00287 272 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 WFS1O76024 890 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 CIAO1O76071 339 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 HOXC6P09630 235 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 ACRP10323 421 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 CYBAP13498 195 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 ALADP13716 330 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 POU3F3P20264 500 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 RFX5P48382 616 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 G3BP1Q13283 466 aaKnown RBP eCLIP7.21□□□□□ -1.265e-8■■□□□ 11.7
SMARCC1-204ENST00000462198 PPIGQ13427 754 aaKnown RBP eCLIP7.21□□□□□ -1.261e-20■□□□□ 9.7
SMARCC1-204ENST00000462198 OS9Q13438 667 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 ELOAQ14241 798 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 METTL24Q5JXM2 366 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 PRAMEF19Q5SWL8 479 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 WDR78Q5VTH9 848 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 MFSD5Q6N075 450 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 ZNF598Q86UK7 904 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 WDR66Q8TBY9 1149 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 SSH3Q8TE77 659 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 HLA-CQ95604 372 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 OSBPL5Q9H0X9 879 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 COPRSQ9NQ92 184 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 AAASQ9NRG9 546 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 TMOD4Q9NZQ9 345 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 PA2G4Q9UQ80 394 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 YBX2Q9Y2T7 364 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-204ENST00000462198 BRWD1Q9NSI6 2320 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms