RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ATP8A2Q9NTI2 1148 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 FAM170AA1A519 330 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 TTLL7Q6ZT98 887 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 TGFBRAP1Q8WUH2 860 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 SH2D4AQ9H788 454 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 PHLDB3Q6NSJ2 640 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 CCDC197Q8NCU1 140 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 GPKOWQ92917 476 aaPredicted RBP eCLIP18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 EYA3Q99504 573 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 ATP10AO60312 1499 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 TRAPPC10P48553 1259 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 CCDC13Q8IYE1 715 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 ORAI2Q96SN7 254 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.6
PTP4A1-201ENST00000370651 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 TBC1D31Q96DN5 1066 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 DHTKD1Q96HY7 919 aaPredicted RBP18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 GBP5Q96PP8 586 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 ADAM9Q13443 819 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 TRPC3Q13507 836 aa18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 DDX23Q9BUQ8 820 aaKnown RBP18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 INTS9Q9NV88 658 aaKnown RBP18.82■□□□□ 0.6
PTP4A1-201ENST00000370651 ADCY8P40145 1251 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 C2orf54Q08AI8 447 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 FNBP4Q8N3X1 1017 aaPredicted RBP18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 CUEDC2Q9H467 287 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 STRN3Q13033 797 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 METTL14Q9HCE5 456 aaKnown RBP18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 ADAM21Q9UKJ8 722 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 KIF3CO14782 793 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 VPS41P49754 854 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 CYP2J2P51589 502 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 NAA35Q5VZE5 725 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 GRK7Q8WTQ7 553 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 NDUFA10O95299 355 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 POLA2Q14181 598 aa18.81■□□□□ 0.6
PTP4A1-201ENST00000370651 M0R2C6 588 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 MYO1CO00159 1063 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 THAP12O43422 761 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 SUN1O94901 812 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 ADORA1P30542 326 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 RASA3Q14644 834 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 ZNF658Q5TYW1 1059 aaPredicted RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 CCDC89Q8N998 374 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 P2RX5Q93086 422 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 RILPQ96NA2 401 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 CASQ2O14958 399 aaPredicted RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 MMP1P03956 469 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 RNF14Q9UBS8 474 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 IFNB1P01574 187 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 IFNAR2P48551 515 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 USH1GQ495M9 461 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 CNBD1Q8NA66 436 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 PUS3Q9BZE2 481 aaKnown RBP18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 ARHGEF10LQ9HCE6 1279 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 FAM114A2Q9NRY5 505 aa18.8■□□□□ 0.6
PTP4A1-201ENST00000370651 CIAO1O76071 339 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 TPH2Q8IWU9 490 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 BANK1Q8NDB2 785 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 PHKG2P15735 406 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 NNTQ13423 1086 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 TYW1Q9NV66 732 aaKnown RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 RWDD2AQ9UIY3 292 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 GGA1Q9UJY5 639 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 LUC7L3O95232 432 aaKnown RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 RUNDC3BQ96NL0 473 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 RIC8AQ9NPQ8 531 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 GNPATO15228 680 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 GYS2P54840 703 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 ZBED6P86452 979 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 NR5A1Q13285 461 aa18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 NAA30Q147X3 362 aaPredicted RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 CC2D1AQ6P1N0 951 aaPredicted RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
PTP4A1-201ENST00000370651 GMNNO75496 209 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 PEX19P40855 299 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 BCAMP50895 628 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms