RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CCDC96Q2M329 555 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 TATDN1Q6P1N9 297 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
SKA2-204ENST00000578519 FAM151AQ8WW52 585 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 TRIM5Q9C035 493 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
SKA2-204ENST00000578519 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 RPS12P25398 132 aaKnown RBP12.66□□□□□ -0.38
SKA2-204ENST00000578519 PRPHP41219 470 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 PTGDRQ13258 359 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 CIAPIN1Q6FI81 312 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 DRC7Q8IY82 874 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 IQUBQ8NA54 791 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
SKA2-204ENST00000578519 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 KCNQ5Q9NR82 932 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
SKA2-204ENST00000578519 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
SKA2-204ENST00000578519 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 PSMD14O00487 310 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
SKA2-204ENST00000578519 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 CDC25BP30305 580 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 ADCY7P51828 1080 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 NFIAQ12857 509 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 SLFN13Q68D06 897 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 SARM1Q6SZW1 724 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 FAM83AQ86UY5 434 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 MLKLQ8NB16 471 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 GPKOWQ92917 476 aaPredicted RBP eCLIP12.65□□□□□ -0.38
SKA2-204ENST00000578519 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
SKA2-204ENST00000578519 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
SKA2-204ENST00000578519 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
SKA2-204ENST00000578519 FOCADQ5VW36 1801 aa12.65□□□□□ -0.39
SKA2-204ENST00000578519 YDJCA8MPS7 323 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 IKBKBO14920 756 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 CYTH3O43739 400 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 TBC1D12O60347 775 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 RAD17O75943 681 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 SLFN14P0C7P3 912 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 KCNA3P22001 575 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 MCM7P33993 719 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 SLC1A4P43007 532 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 ICA1Q05084 483 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 IQCB1Q15051 598 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 POSTNQ15063 836 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 NPY5RQ15761 445 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 LONRF3Q496Y0 759 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
SKA2-204ENST00000578519 LRRC47Q8N1G4 583 aaKnown RBP12.64□□□□□ -0.39
SKA2-204ENST00000578519 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
SKA2-204ENST00000578519 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
SKA2-204ENST00000578519 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 PIGSQ96S52 555 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 GMLQ99445 158 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
SKA2-204ENST00000578519 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
SKA2-204ENST00000578519 MYH6P13533 1939 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 VWA3AA6NCI4 1184 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
SKA2-204ENST00000578519 ZBTB5O15062 677 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 NRDCO43847 1150 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 MYL1P05976 194 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 EEF2P13639 858 aaKnown RBP12.63□□□□□ -0.39
SKA2-204ENST00000578519 CLCN1P35523 988 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
SKA2-204ENST00000578519 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 CUL5Q93034 780 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 CUEDC2Q9H467 287 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 MAGEF1Q9HAY2 307 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms